RNA–Protein interactions for RNA: ENST00000296577.8

ABCE1-201, Transcript of ATP binding cassette subfamily E member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCE1, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-201ENST00000296577 KLRF2D3W0D1 207 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 TECP42680 631 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 BMS1Q14692 1282 aaKnown RBP10.48□□□□□ -0.73
ABCE1-201ENST00000296577 GRIK5Q16478 980 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 TRAPPC3LQ5T215 181 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 TC2NQ8N9U0 490 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
ABCE1-201ENST00000296577 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
ABCE1-201ENST00000296577 CALML3P27482 149 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 RAD51AP2Q09MP3 1159 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 CCDC96Q2M329 555 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 LRRC47Q8N1G4 583 aaKnown RBP10.47□□□□□ -0.73
ABCE1-201ENST00000296577 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 HPS3Q969F9 1004 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 BRIP1Q9BX63 1249 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 TFR2Q9UP52 801 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 COL18A1P39060 1754 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 BMP15O95972 392 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 TRIM21P19474 475 aaKnown RBP10.47□□□□□ -0.73
ABCE1-201ENST00000296577 TNNI2P48788 182 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 ZNF384Q8TF68 577 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 MRPL44Q9H9J2 332 aaKnown RBP10.47□□□□□ -0.73
ABCE1-201ENST00000296577 KCNJ18B7U540 433 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 RPN1P04843 607 aaKnown RBP10.47□□□□□ -0.73
ABCE1-201ENST00000296577 KCNJ12Q14500 433 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
ABCE1-201ENST00000296577 ENC1O14682 589 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 PHACTR2O75167 634 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.73
ABCE1-201ENST00000296577 BTDP43251 543 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
ABCE1-201ENST00000296577 KRT31Q15323 416 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 WWC2Q6AWC2 1192 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 GDAP1L1Q96MZ0 367 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 EYA3Q99504 573 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 ARPP21Q9UBL0 812 aaPredicted RBP10.46□□□□□ -0.73
ABCE1-201ENST00000296577 ZNF142P52746 1687 aaPredicted RBP10.46□□□□□ -0.73
ABCE1-201ENST00000296577 SMCO2A6NFE2 343 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 STX10O60499 249 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 DDAH1O94760 285 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 SCNN1DP51172 638 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 FAM193AP78312 1265 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 PDE4DQ08499 809 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 MFSD14BQ5SR56 506 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 CTAGE1Q96RT6 745 aa10.46□□□□□ -0.73
ABCE1-201ENST00000296577 ZCCHC17Q9NP64 241 aaKnown RBP10.46□□□□□ -0.73
ABCE1-201ENST00000296577 DDX41Q9UJV9 622 aaKnown RBP10.46□□□□□ -0.73
ABCE1-201ENST00000296577 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.74
ABCE1-201ENST00000296577 FXR1P51114 621 aaKnown RBP eCLIP10.46□□□□□ -0.74
ABCE1-201ENST00000296577 GTF2IP78347 998 aa10.46□□□□□ -0.74
ABCE1-201ENST00000296577 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.74
ABCE1-201ENST00000296577 RAD9BQ6WBX8 426 aa10.46□□□□□ -0.74
ABCE1-201ENST00000296577 ZNF804AQ7Z570 1209 aa10.46□□□□□ -0.74
ABCE1-201ENST00000296577 TMEM60Q9H2L4 133 aa10.46□□□□□ -0.74
ABCE1-201ENST00000296577 TBC1D7Q9P0N9 293 aa10.46□□□□□ -0.74
ABCE1-201ENST00000296577 MYO5AQ9Y4I1 1855 aaKnown RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 LDHCP07864 332 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 PRCPP42785 496 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 TNNT3P45378 269 aaPredicted RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 GYS2P54840 703 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 SF3B3Q15393 1217 aaKnown RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 CLEC4GQ6UXB4 293 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 SLC35F6Q8N357 371 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 COA7Q96BR5 231 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 PSMB7Q99436 277 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 EXOC1Q9NV70 894 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 FAM205AQ6ZU69 1335 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 CNTNAP5Q8WYK1 1306 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 PARP1P09874 1014 aaKnown RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 ERCC5P28715 1186 aaPredicted RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 DPYDQ12882 1025 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 PPP2R5BQ15173 497 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 FBXO33Q7Z6M2 555 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 CSGALNACT2Q8N6G5 542 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 TRIML1Q8N9V2 468 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 GSDMAQ96QA5 445 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 MED15Q96RN5 788 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 DEF6Q9H4E7 631 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 PSMA7O14818 248 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 COPB1P53618 953 aaKnown RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 PFKFB3Q16875 520 aaPredicted RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
ABCE1-201ENST00000296577 TMEM47Q9BQJ4 181 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 SLC39A2Q9NP94 309 aa10.45□□□□□ -0.74
ABCE1-201ENST00000296577 MACROD2A1Z1Q3 448 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 DOK7Q18PE1 504 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 TRMT1LQ7Z2T5 733 aaKnown RBP10.44□□□□□ -0.74
ABCE1-201ENST00000296577 WDR66Q8TBY9 1149 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 PIGSQ96S52 555 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 ARFGAP3Q9NP61 516 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 TMEM260Q9NX78 707 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
ABCE1-201ENST00000296577 GOLGA6L9A6NEM1 432 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 B4DLN1 442 aa10.44□□□□□ -0.74
ABCE1-201ENST00000296577 SLURP2P0DP57 97 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms