RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 CCDC77Q9BR77 488 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 THRAP3Q9Y2W1 955 aaKnown RBP12.91□□□□□ -0.34
SNIP1-201ENST00000296215 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-201ENST00000296215 CAPN1P07384 714 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 DDIT3P35638 169 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 SCTRP47872 440 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-201ENST00000296215 FYB2Q5VWT5 728 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 GALNT17Q6IS24 598 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 ECT2Q9H8V3 914 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
SNIP1-201ENST00000296215 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 PFKFB2O60825 505 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 HDGFP51858 240 aaKnown RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 PTGISQ16647 500 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 MAK16Q9BXY0 300 aaKnown RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 HPCAL4Q9UM19 191 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 TRIM43BA6NCK2 446 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 SERPINI2O75830 405 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 MRPS9P82933 396 aaKnown RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 DDHD1Q8NEL9 900 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 ANKRD27Q96NW4 1050 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 CDHR2Q9BYE9 1310 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 MTHFSP49914 203 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 HDLBPQ00341 1268 aaKnown RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 SLC5A9Q2M3M2 681 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 WDR24Q96S15 920 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 ENC1O14682 589 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 NVLO15381 856 aaKnown RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 ERCC5P28715 1186 aaPredicted RBP12.9□□□□□ -0.34
SNIP1-201ENST00000296215 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 TTLL11Q8NHH1 800 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 YIPF2Q9BWQ6 316 aa12.9□□□□□ -0.34
SNIP1-201ENST00000296215 MAGEA13PA6NCF6 341 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 STMN1P16949 149 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 BBOF1Q8ND07 529 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 TATDN2Q93075 761 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 KRT10P13645 584 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 GSTT1P30711 240 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 STX2P32856 288 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ESRRGP62508 458 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 SEC16BQ96JE7 1060 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 MTRF1LQ9UGC7 380 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 DTNBO60941 627 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 LGR5O75473 907 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ABCF3Q9NUQ8 709 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 NOVA2Q9UNW9 492 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ATP11BQ9Y2G3 1177 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 HNRNPRO43390 633 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 RNASE9P60153 205 aaKnown RBP12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ZNF394Q53GI3 561 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 TSHZ3Q63HK5 1081 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 PI16Q6UXB8 463 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 NBPF15Q8N660 670 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ANKRD42Q8N9B4 389 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ETNK1Q9HBU6 452 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
SNIP1-201ENST00000296215 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
SNIP1-201ENST00000296215 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 Q6ZUG5 572 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 KLHL7Q8IXQ5 586 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 PLVAPQ9BX97 442 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 LIN7AO14910 233 aaPredicted RBP12.88□□□□□ -0.35
SNIP1-201ENST00000296215 SPTLC2O15270 562 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 NDUFB5O43674 189 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 TRPA1O75762 1119 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 CCDC159P0C7I6 412 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms