RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 COBLO75128 1261 aa30.19■■■□□ 2.42
U2AF1-201ENST00000291552 MX1P20591 662 aa30.19■■■□□ 2.42
U2AF1-201ENST00000291552 PLS1Q14651 629 aa30.19■■■□□ 2.42
U2AF1-201ENST00000291552 LAMA3Q16787 3333 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 IGKV6D-41A0A0C4DH26 115 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 STRNO43815 780 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 CYBAP13498 195 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 GNAT2P19087 354 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 TDO2P48775 406 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 FAM83BQ5T0W9 1011 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 GOPCQ9HD26 462 aa30.18■■■□□ 2.42
U2AF1-201ENST00000291552 ZMYM1Q5SVZ6 1142 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 OLFML2BQ68BL8 750 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 NCAPG2Q86XI2 1143 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 IFNL3Q8IZI9 196 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 REPS2Q8NFH8 660 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 FSD1Q9BTV5 496 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 MROH8Q9H579 483 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 MKNK2Q9HBH9 465 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 PPP1R9AQ9ULJ8 1098 aa30.17■■■□□ 2.42
U2AF1-201ENST00000291552 PRDM1O75626 825 aa30.16■■■□□ 2.42
U2AF1-201ENST00000291552 DPP9Q86TI2 863 aa30.16■■■□□ 2.42
U2AF1-201ENST00000291552 NUP88Q99567 741 aaPredicted RBP30.16■■■□□ 2.42
U2AF1-201ENST00000291552 NYAP2Q9P242 653 aa30.16■■■□□ 2.42
U2AF1-201ENST00000291552 DDX20Q9UHI6 824 aaKnown RBP30.16■■■□□ 2.42
U2AF1-201ENST00000291552 ZMYND8Q9ULU4 1186 aaPredicted RBP30.16■■■□□ 2.42
U2AF1-201ENST00000291552 SMCHD1A6NHR9 2005 aa30.16■■■□□ 2.42
U2AF1-201ENST00000291552 PATL2C9JE40 543 aaKnown RBP30.15■■■□□ 2.42
U2AF1-201ENST00000291552 ABRAQ8N0Z2 381 aa30.15■■■□□ 2.42
U2AF1-201ENST00000291552 STAP2Q9UGK3 403 aa30.15■■■□□ 2.42
U2AF1-201ENST00000291552 ZNF214Q9UL59 606 aaPredicted RBP30.15■■■□□ 2.42
U2AF1-201ENST00000291552 VWA5AO00534 786 aa30.14■■■□□ 2.42
U2AF1-201ENST00000291552 FOXP2O15409 715 aa30.14■■■□□ 2.42
U2AF1-201ENST00000291552 RAD21O60216 631 aa30.14■■■□□ 2.42
U2AF1-201ENST00000291552 NDUFB10O96000 172 aa30.13■■■□□ 2.41
U2AF1-201ENST00000291552 APPP05067 770 aa30.13■■■□□ 2.41
U2AF1-201ENST00000291552 LRRFIP1Q32MZ4 808 aaKnown RBP30.13■■■□□ 2.41
U2AF1-201ENST00000291552 PLIN4Q96Q06 1357 aa30.13■■■□□ 2.41
U2AF1-201ENST00000291552 CNGA1P29973 690 aa30.12■■■□□ 2.41
U2AF1-201ENST00000291552 LRRC26Q2I0M4 334 aa30.12■■■□□ 2.41
U2AF1-201ENST00000291552 RIOX2Q8IUF8 465 aa30.12■■■□□ 2.41
U2AF1-201ENST00000291552 GDF15Q99988 308 aa30.12■■■□□ 2.41
U2AF1-201ENST00000291552 F5H6K3 240 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 SLC25A27O95847 323 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 SYN1P17600 705 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 KLRC3Q07444 240 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 ANKRD45Q5TZF3 282 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 CCDC129Q6ZRS4 1044 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 CEP95Q96GE4 821 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 MAML3Q96JK9 1138 aa30.11■■■□□ 2.41
U2AF1-201ENST00000291552 HDAC1Q13547 482 aaPredicted RBP30.1■■■□□ 2.41
U2AF1-201ENST00000291552 CLIP2Q9UDT6 1046 aa30.1■■■□□ 2.41
U2AF1-201ENST00000291552 MSCO60682 206 aa30.09■■■□□ 2.41
U2AF1-201ENST00000291552 FCER1AP12319 257 aa30.09■■■□□ 2.41
U2AF1-201ENST00000291552 STAT3P40763 770 aa30.09■■■□□ 2.41
U2AF1-201ENST00000291552 SLF1Q9BQI6 1058 aa30.09■■■□□ 2.41
U2AF1-201ENST00000291552 MTMR4Q9NYA4 1195 aa30.09■■■□□ 2.41
U2AF1-201ENST00000291552 A0A1W2PPC1 479 aa30.08■■■□□ 2.41
U2AF1-201ENST00000291552 PGK2P07205 417 aa30.08■■■□□ 2.41
U2AF1-201ENST00000291552 PRAMEF19Q5SWL8 479 aa30.08■■■□□ 2.41
U2AF1-201ENST00000291552 MKL1Q969V6 931 aa30.08■■■□□ 2.41
U2AF1-201ENST00000291552 MMP19Q99542 508 aa30.08■■■□□ 2.41
U2AF1-201ENST00000291552 NACAP1Q9BZK3 213 aa30.08■■■□□ 2.41
U2AF1-201ENST00000291552 MCM3APO60318 1980 aa30.07■■■□□ 2.4
U2AF1-201ENST00000291552 PPARAQ07869 468 aa30.07■■■□□ 2.4
U2AF1-201ENST00000291552 ANO1Q5XXA6 986 aa30.07■■■□□ 2.4
U2AF1-201ENST00000291552 ZNF444Q8N0Y2 327 aaPredicted RBP30.07■■■□□ 2.4
U2AF1-201ENST00000291552 YTHDC1Q96MU7 727 aaKnown RBP30.07■■■□□ 2.4
U2AF1-201ENST00000291552 NAPBQ9H115 298 aa30.07■■■□□ 2.4
U2AF1-201ENST00000291552 SLC5A4Q9NY91 659 aa30.07■■■□□ 2.4
U2AF1-201ENST00000291552 SOX1O00570 391 aaPredicted RBP30.06■■■□□ 2.4
U2AF1-201ENST00000291552 PDE1AP54750 535 aa30.06■■■□□ 2.4
U2AF1-201ENST00000291552 FAM47AQ5JRC9 791 aa30.06■■■□□ 2.4
U2AF1-201ENST00000291552 LRRC47Q8N1G4 583 aaKnown RBP30.06■■■□□ 2.4
U2AF1-201ENST00000291552 NEDD1Q8NHV4 660 aa30.06■■■□□ 2.4
U2AF1-201ENST00000291552 ZNF287Q9HBT7 754 aa30.06■■■□□ 2.4
U2AF1-201ENST00000291552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.06■■■□□ 2.4
U2AF1-201ENST00000291552 TACC3Q9Y6A5 838 aa30.06■■■□□ 2.4
U2AF1-201ENST00000291552 SEPT4O43236 478 aa30.05■■■□□ 2.4
U2AF1-201ENST00000291552 MAGEA10P43363 369 aaPredicted RBP30.05■■■□□ 2.4
U2AF1-201ENST00000291552 ZNF792Q3KQV3 632 aa30.05■■■□□ 2.4
U2AF1-201ENST00000291552 LTBP2Q14767 1821 aa30.05■■■□□ 2.4
U2AF1-201ENST00000291552 DNM1LO00429 736 aa30.04■■■□□ 2.4
U2AF1-201ENST00000291552 BMP8BP34820 402 aa30.04■■■□□ 2.4
U2AF1-201ENST00000291552 VPS53Q5VIR6 699 aa30.04■■■□□ 2.4
U2AF1-201ENST00000291552 SENP6Q9GZR1 1112 aaPredicted RBP30.04■■■□□ 2.4
U2AF1-201ENST00000291552 RIPK3Q9Y572 518 aa30.04■■■□□ 2.4
U2AF1-201ENST00000291552 TTLL1O95922 423 aa30.03■■■□□ 2.4
U2AF1-201ENST00000291552 PDE4BQ07343 736 aa30.03■■■□□ 2.4
U2AF1-201ENST00000291552 GJC2Q5T442 439 aaPredicted RBP30.03■■■□□ 2.4
U2AF1-201ENST00000291552 SNRNP48Q6IEG0 339 aaKnown RBP30.03■■■□□ 2.4
U2AF1-201ENST00000291552 GMCL1P1Q8NEA9 526 aa30.03■■■□□ 2.4
U2AF1-201ENST00000291552 TEX13BQ9BXU2 312 aa30.03■■■□□ 2.4
U2AF1-201ENST00000291552 SYNPO2Q9UMS6 1093 aa30.03■■■□□ 2.4
U2AF1-201ENST00000291552 TSPY3P0CV98 308 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 TSPY8P0CW00 308 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 COPB2P35606 906 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 TFAP4Q01664 338 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 CTDSPL2Q05D32 466 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 KCTD2Q14681 263 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms