RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 VPS36Q86VN1 386 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 C2CD5Q86YS7 1000 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 KAZALD1Q96I82 304 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 PAIP2Q9BPZ3 127 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 MAN1B1Q9UKM7 699 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 DIP2BQ9P265 1576 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 WTIPA6NIX2 430 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 KCNJ18B7U540 433 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 CXCR5P32302 372 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 IL6STP40189 918 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 KCNJ12Q14500 433 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 UTP14CQ5TAP6 766 aaKnown RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 REXO1Q8N1G1 1221 aaKnown RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 STRBPQ96SI9 672 aaKnown RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 ZNF408Q9H9D4 720 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 CCDC169A6NNP5 214 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 CMA1P23946 247 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 UBE4AQ14139 1066 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 TTC19Q6DKK2 380 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 KIAA1524Q8TCG1 905 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 GJA10Q969M2 543 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 RTEL1Q9NZ71 1219 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 MYO6Q9UM54 1294 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 GINS2Q9Y248 185 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PCDHB13Q9Y5F0 798 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 VWDEQ8N2E2 1590 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PXDNQ92626 1479 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PALLDQ8WX93 1383 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 B4DLN1 442 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 WDHD1O75717 1129 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 KIF20AO95235 890 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 BMP15O95972 392 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 CASP14P31944 242 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 ADCY7P51828 1080 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 ARHGAP44Q17R89 818 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 SPECC1LQ69YQ0 1117 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 TCHPQ9BT92 498 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 MROH1Q8NDA8 1641 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 CYP19A1P11511 503 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 CDR1P51861 262 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 LARGE2Q8N3Y3 721 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PAF1Q8N7H5 531 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 ACRBPQ8NEB7 543 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PPP1R13BQ96KQ4 1090 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 TLDC2A0PJX2 215 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PPIP5K2O43314 1243 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 FMNL1O95466 1100 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 RBL2Q08999 1139 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 NONOQ15233 471 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBR1-201ENST00000290650 UBE3CQ15386 1083 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 JAKMIP2Q96AA8 810 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 PIGSQ96S52 555 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 MRPL44Q9H9J2 332 aaKnown RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 USP31Q70CQ4 1352 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 BACH1O14867 736 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 KRT86O43790 486 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 KRT5P13647 590 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 SLC39A14Q15043 492 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 MAP9Q49MG5 647 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 ATL3Q6DD88 541 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 KLHL7Q8IXQ5 586 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 MARCH10Q8NA82 808 aaPredicted RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 ERMNQ8TAM6 284 aa5.35□□□□□ -1.55
UBR1-201ENST00000290650 QTRT2Q9H974 415 aaKnown RBP5.35□□□□□ -1.55
UBR1-201ENST00000290650 CPDO75976 1380 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 TRIM49BA6NDI0 452 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 RAD17O75943 681 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 MMP1P03956 469 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 PLCG2P16885 1265 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 CAPN2P17655 700 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 KLRK1P26718 216 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 HPDP32754 393 aaPredicted RBP5.34□□□□□ -1.55
UBR1-201ENST00000290650 CYP2J2P51589 502 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 MYCT1Q8N699 235 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.34□□□□□ -1.555e-7■■■■□ 23
UBR1-201ENST00000290650 GOLGA6L9A6NEM1 432 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
UBR1-201ENST00000290650 EEF2P13639 858 aaKnown RBP5.34□□□□□ -1.55
UBR1-201ENST00000290650 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
UBR1-201ENST00000290650 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.34□□□□□ -1.55
UBR1-201ENST00000290650 HPS3Q969F9 1004 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 MINPP1Q9UNW1 487 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 PPP2R2CQ9Y2T4 447 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 H0YIN7 160 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 TACC1O75410 805 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 ABCB4P21439 1286 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 CNGA4Q8IV77 575 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 MLKLQ8NB16 471 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 LY9Q9HBG7 655 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 DLC1Q96QB1 1528 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 NRXN1Q9ULB1 1477 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 SFI1A8K8P3 1242 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 NSMFQ6X4W1 530 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 BICDL2A1A5D9 508 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 SERPINB2P05120 415 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 CTNNA2P26232 953 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 CCDC50Q8IVM0 306 aa5.34□□□□□ -1.55
UBR1-201ENST00000290650 ARPP21Q9UBL0 812 aaPredicted RBP5.34□□□□□ -1.55
UBR1-201ENST00000290650 GDAQ9Y2T3 454 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms