RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 TBC1D12O60347 775 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 USP2O75604 605 aaPredicted RBP13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 NOVP48745 357 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 NTRK3Q16288 839 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 OTOFQ9HC10 1997 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 OTUD7BQ6GQQ9 843 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 KLRG1Q96E93 195 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
CHRNB3-201ENST00000289957 TTLL1O95922 423 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 SASS6Q6UVJ0 657 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 TMEM179Q6ZVK1 233 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 KCTD1Q719H9 257 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 SHISA4Q96DD7 197 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 MAD2L2Q9UI95 211 aa13.27□□□□□ -0.28
CHRNB3-201ENST00000289957 RTN1Q16799 776 aa13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 PNMA8AQ86V59 439 aaPredicted RBP13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 RNF214Q8ND24 703 aa13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 ANKS1AQ92625 1134 aa13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 UBA5Q9GZZ9 404 aa13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
CHRNB3-201ENST00000289957 DYNC1I1O14576 645 aa13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 CYTH3O43739 400 aa13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 PDHBP11177 359 aa13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 TAL1P17542 331 aaPredicted RBP13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 SLC16A2P36021 539 aa13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 FUT2Q10981 343 aa13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
CHRNB3-201ENST00000289957 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 PDCP20941 246 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 SNAP25P60880 206 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 VGLL4Q14135 290 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 GPCPD1Q9NPB8 672 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 ZNF341Q9BYN7 854 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 ZNF112Q9UJU3 913 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 PAPPA2Q9BXP8 1791 aa13.25□□□□□ -0.29
CHRNB3-201ENST00000289957 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 TPM3P06753 285 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 SYNE3Q6ZMZ3 975 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 SLC26A6Q9BXS9 759 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 DOCK1Q14185 1865 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 TRIM75PA6NK02 468 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 F5H6K3 240 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 CPLX1O14810 134 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 NDUFB10O96000 172 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 PTMAP06454 111 aaKnown RBP13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 PTPRAP18433 802 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 KLRC3Q07444 240 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 TMTC3Q6ZXV5 915 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 SNCAIPQ9Y6H5 919 aa13.24□□□□□ -0.29
CHRNB3-201ENST00000289957 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 CTNND1O60716 968 aaKnown RBP13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 DDAH1O94760 285 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 MTMR2Q13614 643 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 GRM4Q14833 912 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 SUPT20HL1Q3ZLR7 823 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 ELP3Q9H9T3 547 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 NYAP2Q9P242 653 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 NID2Q14112 1375 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 PALM3A6NDB9 673 aaPredicted RBP13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 FIBPO43427 364 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 ASNSP08243 561 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 SPP2Q13103 211 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 CST9Q5W186 159 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 USP25Q9UHP3 1055 aa13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
CHRNB3-201ENST00000289957 SMCHD1A6NHR9 2005 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 UQCRHLA0A096LP55 91 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms