RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 USP17L22D6RA61 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L17D6RBQ6 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L19D6RCP7 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L20D6RJB6 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 GOLGA8HP0CJ92 632 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L24Q0WX57 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 TSGA10IPQ3SY00 556 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 IGDCC4Q8TDY8 1250 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 ERO1AQ96HE7 468 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 MYL10Q9BUA6 226 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 ARHGAP39Q9C0H5 1083 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 FLOT1O75955 427 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 CASTP20810 708 aaKnown RBP20.43■□□□□ 0.86
ATG3-201ENST00000283290 MCM5P33992 734 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 CCDC96Q2M329 555 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 CTU1Q7Z7A3 348 aaKnown RBP20.43■□□□□ 0.86
ATG3-201ENST00000283290 DGKHQ86XP1 1220 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 ANKRD13CQ8N6S4 541 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 PNMA1Q8ND90 353 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 GMCL1P1Q8NEA9 526 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 LPAR1Q92633 364 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 PAGR1Q9BTK6 254 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 UPF3BQ9BZI7 483 aaKnown RBP20.43■□□□□ 0.86
ATG3-201ENST00000283290 CPVLQ9H3G5 476 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 KAT14Q9H8E8 782 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 TXNRD2Q9NNW7 524 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 GPCPD1Q9NPB8 672 aa20.43■□□□□ 0.86
ATG3-201ENST00000283290 WDR46O15213 610 aaKnown RBP20.42■□□□□ 0.86
ATG3-201ENST00000283290 SNAP25P60880 206 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 HERVK_113P62684 666 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 LACTBP83111 547 aaPredicted RBP20.42■□□□□ 0.86
ATG3-201ENST00000283290 WTAPQ15007 396 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 ATG4CQ96DT6 458 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 LY9Q9HBG7 655 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 SPDYE16A6NNV3 312 aaPredicted RBP20.42■□□□□ 0.86
ATG3-201ENST00000283290 SH2B2O14492 632 aaPredicted RBP20.42■□□□□ 0.86
ATG3-201ENST00000283290 RXRAP19793 462 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 CTGFP29279 349 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 SLC16A2P36021 539 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 SLC1A4P43007 532 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 TTC14Q96N46 770 aa20.42■□□□□ 0.86
ATG3-201ENST00000283290 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
ATG3-201ENST00000283290 ERICH2A1L162 156 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 TMEM232C9JQI7 657 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 PDHBP11177 359 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 BMP3P12645 472 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 EXOSC10Q01780 885 aaKnown RBP20.41■□□□□ 0.86
ATG3-201ENST00000283290 KRT32Q14532 448 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 MCOLN1Q9GZU1 580 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 TRIM17Q9Y577 477 aa20.41■□□□□ 0.86
ATG3-201ENST00000283290 A0A0G2JMZ2 1700 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 SMCHD1A6NHR9 2005 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 HTTP42858 3142 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 IKQ13123 557 aaPredicted RBP20.4■□□□□ 0.86
ATG3-201ENST00000283290 BLOC1S2Q6QNY1 142 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 DHX32Q7L7V1 743 aaKnown RBP20.4■□□□□ 0.86
ATG3-201ENST00000283290 OTOP1Q7RTM1 612 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 ANKS1AQ92625 1134 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 KIFC2Q96AC6 838 aa20.4■□□□□ 0.86
ATG3-201ENST00000283290 DOCK3Q8IZD9 2030 aa20.39■□□□□ 0.86
ATG3-201ENST00000283290 TAL1P17542 331 aaPredicted RBP20.39■□□□□ 0.85
ATG3-201ENST00000283290 GCLCP48506 637 aaPredicted RBP20.39■□□□□ 0.85
ATG3-201ENST00000283290 SART3Q15020 963 aaKnown RBP20.39■□□□□ 0.85
ATG3-201ENST00000283290 FAM110CQ1W6H9 321 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 Q3C1V9 767 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 PPP4R3BQ5MIZ7 849 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 NFXL1Q6ZNB6 911 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 CCDC144CPQ8IYA2 1237 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 GMCL1Q96IK5 515 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 EFCC1Q9HA90 598 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 BTBD7Q9P203 1132 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 RBPJLQ9UBG7 517 aa20.39■□□□□ 0.85
ATG3-201ENST00000283290 BAZ2BQ9UIF8 2168 aaKnown RBP20.39■□□□□ 0.85
ATG3-201ENST00000283290 EPB41L2O43491 1005 aaKnown RBP20.38■□□□□ 0.85
ATG3-201ENST00000283290 CNMDO75829 334 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 RPS6KB1P23443 525 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 DSG3P32926 999 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 COG2Q14746 738 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 KIF22Q14807 665 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 CCDC178Q5BJE1 867 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 Q6ZUG5 572 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 STAG2Q8N3U4 1231 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 NUP133Q8WUM0 1156 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 PSMC4P43686 418 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 SLC4A3P48751 1232 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 TRIM47Q96LD4 638 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 BRPF3Q9ULD4 1205 aa20.38■□□□□ 0.85
ATG3-201ENST00000283290 MYH6P13533 1939 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 DCAF4Q8WV16 495 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 TMEM87BQ96K49 555 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 SLF1Q9BQI6 1058 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 BACH2Q9BYV9 841 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 MORF4L1Q9UBU8 362 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 PPP1R9AQ9ULJ8 1098 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 NAP1L2Q9ULW6 460 aaPredicted RBP20.37■□□□□ 0.85
ATG3-201ENST00000283290 SYNPO2Q9UMS6 1093 aa20.37■□□□□ 0.85
ATG3-201ENST00000283290 FGD1P98174 961 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms