RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 VSIG1Q86XK7 387 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 DIS3L2Q8IYB7 885 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RNF169Q8NCN4 708 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 LZTFL1Q9NQ48 299 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ZRANB1Q9UGI0 708 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ARMCX3Q9UH62 379 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RAPGEF6Q8TEU7 1601 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 LIG4P49917 911 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 GPATCH4Q5T3I0 446 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RINT1Q6NUQ1 792 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 PIK3AP1Q6ZUJ8 805 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 METTL13Q8N6R0 699 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RSAD2Q8WXG1 361 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 AP5M1Q9H0R1 490 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 LCMT1Q9UIC8 334 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 CTNND2Q9UQB3 1225 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 FAN1Q9Y2M0 1017 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 A0A1B0GUL7 405 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF189O75820 626 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 IFNA8P32881 189 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 STAT1P42224 750 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 DENND2CQ68D51 928 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RAB44Q7Z6P3 723 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 NDUFAF2Q8N183 169 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SSH2Q76I76 1423 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 PPFIA3O75145 1194 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 MYO1EQ12965 1108 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ARHGEF16Q5VV41 709 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 EDEM3Q9BZQ6 932 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 CUEDC2Q9H467 287 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 VPS37BQ9H9H4 285 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 GDPD2Q9HCC8 539 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 TYW1Q9NV66 732 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 BZW2Q9Y6E2 419 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SMIM23A6NLE4 172 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 GPAA1O43292 621 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ANXA13P27216 316 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RNASELQ05823 741 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 TNNI3KQ59H18 835 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 DPP9Q86TI2 863 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 KBTBD3Q8NAB2 608 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 DRC3Q9H069 523 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ANAPC5Q9UJX4 755 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 PA2G4Q9UQ80 394 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 FPGT-TNNI3KV9GXZ4 949 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SBNO2Q9Y2G9 1366 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 A6NJR5 290 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TTC36A6NLP5 189 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 NDUFAB1O14561 156 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 HNRNPDLO14979 420 aaKnown RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 RNF8O76064 485 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 GCNT3O95395 438 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 IREB2P48200 963 aaKnown RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 PDE6CP51160 858 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 GIMAP6Q6P9H5 292 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 SPATS2Q86XZ4 545 aaKnown RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 GBP7Q8N8V2 638 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TCEANC2Q96MN5 208 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 KRT12Q99456 494 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 RBSNQ9H1K0 784 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 MTIF3Q9H2K0 278 aaKnown RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TNNQ9UQP3 1299 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 ORC6Q9Y5N6 252 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 LAD1O00515 517 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 GARSP41250 739 aaKnown RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 DNM1Q05193 864 aaKnown RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 APOBRQ0VD83 1088 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 ALCAMQ13740 583 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 NOLC1Q14978 699 aaKnown RBP eCLIP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 CHST3Q7LGC8 479 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 SPDYE1Q8NFV5 336 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TRIM58Q8NG06 486 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 HELBQ8NG08 1087 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 USP21Q9UK80 565 aa4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TRPC5Q9UL62 973 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-201ENST00000283254 TMEM247A6NEH6 219 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF853P0CG23 659 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CCDC93Q567U6 631 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 NECAB1Q8N987 351 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 AFAP1L1Q8TED9 768 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 SKA2Q8WVK7 121 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 MID2Q9UJV3 735 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 V9GY48 417 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 DISP3Q9P2K9 1392 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 KDM2BQ8NHM5 1336 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 SYCP2Q9BX26 1530 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TLR3O15455 904 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 STX17P56962 302 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 METTL23Q86XA0 190 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TRIM42Q8IWZ5 723 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CTAGE3PQ8IX95 158 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TRIM56Q9BRZ2 755 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PAGR1Q9BTK6 254 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 MED10Q9BTT4 135 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 IFNKQ9P0W0 207 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 NPC1L1Q9UHC9 1359 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 DDAH1O94760 285 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 IFNB1P01574 187 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms