RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SHROOM1Q2M3G4 852 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-201ENST00000279247 KCNF1Q9H3M0 494 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 GPCPD1Q9NPB8 672 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 SRPRBQ9Y5M8 271 aaKnown RBP20.51■□□□□ 0.87
CAPN1-201ENST00000279247 GOLGA6L6A8MZA4 724 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 NLRP12P59046 1061 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 PTPN21Q16825 1174 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 PYCARDQ9ULZ3 195 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 CDK5RAP2Q96SN8 1893 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 SMC2O95347 1197 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 DPEP1P16444 411 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 BLIDQ8IZY5 108 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 SERPINB13Q9UIV8 391 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 ARID5BQ14865 1188 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 APOBEC3HQ6NTF7 200 aaKnown RBP20.5■□□□□ 0.87
CAPN1-201ENST00000279247 RGS22Q8NE09 1264 aa20.5■□□□□ 0.87
CAPN1-201ENST00000279247 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
CAPN1-201ENST00000279247 A0A087X0B3 334 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 CAVIN2O95810 425 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 INF2Q27J81 1249 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 R3HCC1Q9Y3T6 440 aaKnown RBP20.49■□□□□ 0.87
CAPN1-201ENST00000279247 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 CCDC194A0A1B0GVG4 234 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 NAPAP54920 295 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 PLA2G4DQ86XP0 818 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 CERS3Q8IU89 383 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 TNFRSF25Q93038 417 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 SLX4Q8IY92 1834 aa20.49■□□□□ 0.87
CAPN1-201ENST00000279247 PIGSQ96S52 555 aa20.48■□□□□ 0.87
CAPN1-201ENST00000279247 GNAQP50148 359 aa20.48■□□□□ 0.87
CAPN1-201ENST00000279247 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-201ENST00000279247 POSTNQ15063 836 aa20.48■□□□□ 0.87
CAPN1-201ENST00000279247 PODNQ7Z5L7 613 aa20.48■□□□□ 0.87
CAPN1-201ENST00000279247 TOP1P11387 765 aaKnown RBP20.47■□□□□ 0.87
CAPN1-201ENST00000279247 ATP1A3P13637 1013 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 TIGD1Q96MW7 591 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 OSBPL5Q9H0X9 879 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-201ENST00000279247 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 DDX60LQ5H9U9 1706 aaKnown RBP20.47■□□□□ 0.87
CAPN1-201ENST00000279247 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-201ENST00000279247 PLIN2Q99541 437 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 DLEC1Q9Y238 1755 aa20.47■□□□□ 0.87
CAPN1-201ENST00000279247 ANKS1AQ92625 1134 aa20.46■□□□□ 0.87
CAPN1-201ENST00000279247 IFNKQ9P0W0 207 aa20.46■□□□□ 0.87
CAPN1-201ENST00000279247 PCDHA4Q9UN74 947 aa20.46■□□□□ 0.87
CAPN1-201ENST00000279247 CALML3P27482 149 aa20.46■□□□□ 0.87
CAPN1-201ENST00000279247 SLC16A2P36021 539 aa20.46■□□□□ 0.87
CAPN1-201ENST00000279247 TRMT44Q8IYL2 757 aaKnown RBP20.46■□□□□ 0.87
CAPN1-201ENST00000279247 MTMR4Q9NYA4 1195 aa20.46■□□□□ 0.87
CAPN1-201ENST00000279247 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
CAPN1-201ENST00000279247 RASSF8Q8NHQ8 419 aa20.45■□□□□ 0.87
CAPN1-201ENST00000279247 TDRD3Q9H7E2 651 aaKnown RBP20.45■□□□□ 0.87
CAPN1-201ENST00000279247 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 CCDC96Q2M329 555 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 KLHL10Q6JEL2 608 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 COA7Q96BR5 231 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 LRRC37AA6NMS7 1700 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-201ENST00000279247 STXBP3O00186 592 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 ZBTB22O15209 634 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 BMP6P22004 513 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 JAKMIP3Q5VZ66 844 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 CNKSR1Q969H4 720 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 NRXN2Q9P2S2 1712 aa20.45■□□□□ 0.86
CAPN1-201ENST00000279247 TTBK2Q6IQ55 1244 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 KCTD1Q719H9 257 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 SMARCE1Q969G3 411 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 RRP36Q96EU6 259 aaKnown RBP20.44■□□□□ 0.86
CAPN1-201ENST00000279247 TUBE1Q9UJT0 475 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 RAD17O75943 681 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 PDHBP11177 359 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 KCNA3P22001 575 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 NOLC1Q14978 699 aaKnown RBP eCLIP20.44■□□□□ 0.86
CAPN1-201ENST00000279247 DACT2Q5SW24 774 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 XPO4Q9C0E2 1151 aaKnown RBP20.44■□□□□ 0.86
CAPN1-201ENST00000279247 BLZF1Q9H2G9 400 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 BARHL2Q9NY43 387 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 BIN2Q9UBW5 565 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-201ENST00000279247 PCDHA6Q9UN73 950 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 PCDHA8Q9Y5H6 950 aa20.44■□□□□ 0.86
CAPN1-201ENST00000279247 SMCO2A6NFE2 343 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 PP2D1A8MPX8 630 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 COBLO75128 1261 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 SHMT1P34896 483 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 GABPAQ06546 454 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 LETM2Q2VYF4 491 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 TRIM34Q9BYJ4 488 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
CAPN1-201ENST00000279247 MAN1B1Q9UKM7 699 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 ACTN4O43707 911 aaKnown RBP20.43■□□□□ 0.86
CAPN1-201ENST00000279247 GDF11O95390 407 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 IL17AQ16552 155 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 STYK1Q6J9G0 422 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 HHIPL2Q6UWX4 724 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 SMYD4Q8IYR2 804 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms