RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 NBPF3Q9H094 633 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 NEDD4P46934 1319 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 RAD50Q92878 1312 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 RLFQ13129 1914 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 ORC4O43929 436 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 INHAP05111 366 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 RGS19P49795 217 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 DSCC1Q9BVC3 393 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 MTMR7Q9Y216 660 aa16.11■□□□□ 0.17
CT55-201ENST00000276241 ZNF213O14771 459 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 CHMLP26374 656 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 AKNAD1Q5T1N1 836 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 PXYLP1Q8TE99 480 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 STAG1Q8WVM7 1258 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
CT55-201ENST00000276241 SPATC1LQ9H0A9 340 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 IL17RBQ9NRM6 502 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 GJD2Q9UKL4 321 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 PPP1R9AQ9ULJ8 1098 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 IVNS1ABPQ9Y6Y0 642 aa16.1■□□□□ 0.17
CT55-201ENST00000276241 CCL5P13501 91 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 SLFN13Q68D06 897 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 GMCL1P1Q8NEA9 526 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 MKL1Q969V6 931 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
CT55-201ENST00000276241 RNF41Q9H4P4 317 aaPredicted RBP16.09■□□□□ 0.17
CT55-201ENST00000276241 FGRP09769 529 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 ERCC3P19447 782 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 EN2P19622 333 aaPredicted RBP16.08■□□□□ 0.16
CT55-201ENST00000276241 RGS2P41220 211 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 TMEM132BQ14DG7 1078 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
CT55-201ENST00000276241 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 TRIB2Q92519 343 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 APBA2Q99767 749 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 SYNPO2Q9UMS6 1093 aa16.08■□□□□ 0.16
CT55-201ENST00000276241 COL11A1P12107 1806 aaPredicted RBP16.07■□□□□ 0.16
CT55-201ENST00000276241 VWA5AO00534 786 aa16.07■□□□□ 0.16
CT55-201ENST00000276241 HMGCRP04035 888 aa16.07■□□□□ 0.16
CT55-201ENST00000276241 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
CT55-201ENST00000276241 IKQ13123 557 aaPredicted RBP16.07■□□□□ 0.16
CT55-201ENST00000276241 MORN1Q5T089 497 aa16.07■□□□□ 0.16
CT55-201ENST00000276241 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
CT55-201ENST00000276241 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
CT55-201ENST00000276241 GTF3C3Q9Y5Q9 886 aa16.07■□□□□ 0.16
CT55-201ENST00000276241 PCP11498 1178 aaKnown RBP16.06■□□□□ 0.16
CT55-201ENST00000276241 BMP3P12645 472 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 PTPREP23469 700 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 SLC1A4P43007 532 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 TRIM32Q13049 653 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 MAP2K5Q13163 448 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 CCL14Q16627 93 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 NKX2-3Q8TAU0 364 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 ESR2Q92731 530 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 ZKSCAN3Q9BRR0 538 aa16.06■□□□□ 0.16
CT55-201ENST00000276241 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
CT55-201ENST00000276241 CENPFP49454 3210 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 SLC15A5A6NIM6 579 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 TMEM232C9JQI7 657 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 MCCP23508 829 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 GRB14Q14449 540 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 CCDC96Q2M329 555 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 USP6NLQ92738 828 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 FEM1BQ9UK73 627 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 ADAMTS5Q9UNA0 930 aa16.05■□□□□ 0.16
CT55-201ENST00000276241 B4E1Z4 1266 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 SGSM2O43147 1006 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 KDM4AO75164 1064 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 STAT2P52630 851 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 PTH1RQ03431 593 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
CT55-201ENST00000276241 REPS2Q8NFH8 660 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 GMCL1Q96IK5 515 aa16.04■□□□□ 0.16
CT55-201ENST00000276241 ZNF214Q9UL59 606 aaPredicted RBP16.04■□□□□ 0.16
CT55-201ENST00000276241 ZBED4O75132 1171 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 SLC25A27O95847 323 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 XRCC5P13010 732 aaKnown RBP16.03■□□□□ 0.16
CT55-201ENST00000276241 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
CT55-201ENST00000276241 ADORA2AP29274 412 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 STAT3P40763 770 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
CT55-201ENST00000276241 CPXCR1Q8N123 301 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
CT55-201ENST00000276241 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms