RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SHROOM1Q2M3G4 852 aaPredicted RBP18.14■□□□□ 0.49
VPS26A-201ENST00000263559 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
VPS26A-201ENST00000263559 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 UBA5Q9GZZ9 404 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 TAOK3Q9H2K8 898 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
VPS26A-201ENST00000263559 ATRNL1Q5VV63 1379 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 ZNF202O95125 648 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 SMARCA1P28370 1054 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 CCDC173Q0VFZ6 552 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 TATDN1Q6P1N9 297 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 SASS6Q6UVJ0 657 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 HEATR3Q7Z4Q2 680 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 KRI1Q8N9T8 703 aaKnown RBP18.14■□□□□ 0.49
VPS26A-201ENST00000263559 PPP1R9BQ96SB3 815 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 VAT1LQ9HCJ6 419 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 CLRN2A0PK11 232 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 CALML3P27482 149 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 RESP18Q5W5W9 173 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 BARHL2Q9NY43 387 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 HPSEQ9Y251 543 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
VPS26A-201ENST00000263559 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 STXBP3O00186 592 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 WNT7AO00755 349 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 METTL16Q86W50 562 aaKnown RBP18.13■□□□□ 0.49
VPS26A-201ENST00000263559 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 AGBL3Q8NEM8 1001 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 SDF4Q9BRK5 362 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 FBXO2Q9UK22 296 aaPredicted RBP18.13■□□□□ 0.49
VPS26A-201ENST00000263559 PCDHA4Q9UN74 947 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 CEP131Q9UPN4 1083 aa18.13■□□□□ 0.49
VPS26A-201ENST00000263559 NFKBIEO00221 500 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 PTPREP23469 700 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 GRIN1Q05586 938 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 PIK3AP1Q6ZUJ8 805 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 TMOD2Q9NZR1 351 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 ZNF70Q9UC06 446 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-201ENST00000263559 NOL7Q9UMY1 257 aaKnown RBP18.12■□□□□ 0.49
VPS26A-201ENST00000263559 CD2APQ9Y5K6 639 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 PSDA5PKW4 1024 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-201ENST00000263559 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 RRP36Q96EU6 259 aaKnown RBP18.12■□□□□ 0.49
VPS26A-201ENST00000263559 PIGSQ96S52 555 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 RIOX1Q9H6W3 641 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 BCS1LQ9Y276 419 aa18.12■□□□□ 0.49
VPS26A-201ENST00000263559 FAM237AA0A1B0GTK4 181 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 ANO6Q4KMQ2 910 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 ERCC4Q92889 916 aaPredicted RBP18.11■□□□□ 0.49
VPS26A-201ENST00000263559 CSRNP1Q96S65 589 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 COL2A1P02458 1487 aaPredicted RBP18.11■□□□□ 0.49
VPS26A-201ENST00000263559 SYKP43405 635 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 SPECC1Q5M775 1068 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 CCDC148Q8NFR7 591 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 JDP2Q8WYK2 163 aa18.11■□□□□ 0.49
VPS26A-201ENST00000263559 SRPRBQ9Y5M8 271 aaKnown RBP18.11■□□□□ 0.49
VPS26A-201ENST00000263559 M0R2N6 131 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 ZNF174Q15697 407 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 TTC38Q5R3I4 469 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 CIAPIN1Q6FI81 312 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.493e-9■■■■■ 38.4
VPS26A-201ENST00000263559 GDF11O95390 407 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 EEF2P13639 858 aaKnown RBP18.1■□□□□ 0.49
VPS26A-201ENST00000263559 PTGER2P43116 358 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 ZNF543Q08ER8 600 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 SEPT2Q15019 361 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 RASGRP4Q8TDF6 673 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 KANSL2Q9H9L4 492 aa18.1■□□□□ 0.49
VPS26A-201ENST00000263559 SEC63Q9UGP8 760 aaKnown RBP18.1■□□□□ 0.49
VPS26A-201ENST00000263559 DAGLBQ8NCG7 672 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 FAM200AQ8TCP9 573 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 PDLIM2Q96JY6 352 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 ABCB5Q2M3G0 1257 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 GALNT17Q6IS24 598 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 SIAH1Q8IUQ4 282 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 MTMR14Q8NCE2 650 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 FAM151AQ8WW52 585 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 MKL1Q969V6 931 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 NYAP2Q9P242 653 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 PCDHA6Q9UN73 950 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 PCDHA8Q9Y5H6 950 aa18.09■□□□□ 0.49
VPS26A-201ENST00000263559 MORC2Q9Y6X9 1032 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-201ENST00000263559 TRAPPC10P48553 1259 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 NAPAP54920 295 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 RRP1BQ14684 758 aaKnown RBP18.08■□□□□ 0.49
VPS26A-201ENST00000263559 TMEM179Q6ZVK1 233 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 ZNF579Q8NAF0 562 aaKnown RBP18.08■□□□□ 0.49
VPS26A-201ENST00000263559 TIGD1Q96MW7 591 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 KCNH3Q9ULD8 1083 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 CNTNAP1P78357 1384 aa18.08■□□□□ 0.49
VPS26A-201ENST00000263559 JAG1P78504 1218 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms