RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 HMGCS2P54868 508 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 BACE1P56817 501 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 E2F4Q16254 413 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 USP26Q9BXU7 913 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 KANSL2Q9H9L4 492 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 LOC285556D6RIA3 1793 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 SLC27A2O14975 620 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 EEF2P13639 858 aaKnown RBP13.65□□□□□ -0.22
PFDN1-201ENST00000261813 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
PFDN1-201ENST00000261813 GADL1Q6ZQY3 521 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 STOX1Q6ZVD7 989 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 FEZ1Q99689 392 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 KRTAP3-3Q9BYR6 98 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 KRTAP3-2Q9BYR7 98 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 KIAA1683Q9H0B3 1180 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 IL17RBQ9NRM6 502 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 SAGE1Q9NXZ1 904 aa13.65□□□□□ -0.22
PFDN1-201ENST00000261813 B4E1Z4 1266 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 C19orf81C9J6K1 198 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 E7EWF7 191 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 EVI5O60447 810 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 NMT2O60551 498 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
PFDN1-201ENST00000261813 TREML2Q5T2D2 321 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 FASTKD5Q7L8L6 764 aaKnown RBP13.64□□□□□ -0.23
PFDN1-201ENST00000261813 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-201ENST00000261813 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 MTMR4Q9NYA4 1195 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
PFDN1-201ENST00000261813 KDM4AO75164 1064 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 TRPA1O75762 1119 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 NOVP48745 357 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 ANAPC15P60006 121 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 KIAA1755Q5JYT7 1200 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 USP17L2Q6R6M4 530 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 ESR2Q92731 530 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 CNNM2Q9H8M5 875 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 TMX2Q9Y320 296 aa13.63□□□□□ -0.23
PFDN1-201ENST00000261813 PDHXO00330 501 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 TTLL1O95922 423 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 NT5C2P49902 561 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 USP14P54578 494 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 MKL1Q969V6 931 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 KRT23Q9C075 422 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 R3HDMLQ9H3Y0 253 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 ZCCHC17Q9NP64 241 aaKnown RBP13.62□□□□□ -0.23
PFDN1-201ENST00000261813 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 TMOD4Q9NZQ9 345 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 ZSWIM5Q9P217 1185 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
PFDN1-201ENST00000261813 TBC1D8O95759 1140 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 ALDH1A1P00352 501 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-201ENST00000261813 VCAM1P19320 739 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 HSPA4P34932 840 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 CRHR2Q13324 411 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 COL9A3Q14050 684 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-201ENST00000261813 CYB5R4Q7L1T6 521 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
PFDN1-201ENST00000261813 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 SLC45A1Q9Y2W3 748 aa13.61□□□□□ -0.23
PFDN1-201ENST00000261813 DPYSL4O14531 572 aa13.6□□□□□ -0.23
PFDN1-201ENST00000261813 ANP32AP39687 249 aaKnown RBP13.6□□□□□ -0.23
PFDN1-201ENST00000261813 TRDNQ13061 729 aa13.6□□□□□ -0.23
PFDN1-201ENST00000261813 TAF1CQ15572 869 aaPredicted RBP13.6□□□□□ -0.23
PFDN1-201ENST00000261813 RCSD1Q6JBY9 416 aa13.6□□□□□ -0.23
PFDN1-201ENST00000261813 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
PFDN1-201ENST00000261813 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
PFDN1-201ENST00000261813 KCNB2Q92953 911 aa13.6□□□□□ -0.23
PFDN1-201ENST00000261813 STX8Q9UNK0 236 aa13.6□□□□□ -0.23
PFDN1-201ENST00000261813 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
PFDN1-201ENST00000261813 CASP8AP2Q9UKL3 1982 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 CYP2C8P10632 490 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 HOXA7P31268 230 aaPredicted RBP13.59□□□□□ -0.23
PFDN1-201ENST00000261813 ANTXR2P58335 489 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 TSGA10IPQ3SY00 556 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 RALYLQ86SE5 291 aaKnown RBP13.59□□□□□ -0.23
PFDN1-201ENST00000261813 IQCA1Q86XH1 822 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 SPICE1Q8N0Z3 855 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 LPAR1Q92633 364 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 SYNPO2Q9UMS6 1093 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 TNKSO95271 1327 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 ADGRA2Q96PE1 1338 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms