RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 IFIH1Q9BYX4 1025 aaKnown RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 FTCDO95954 541 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 CYP2D6P10635 497 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 RASSF7Q02833 373 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 TRIM65Q6PJ69 517 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 DYDC1Q8WWB3 177 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 ERBB3P21860 1342 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 KRT83P78385 493 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 DCAF17Q5H9S7 520 aaPredicted RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 SELENOSQ9BQE4 189 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 MFAP3LO75121 409 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 PARP1P09874 1014 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 GUCY2DQ02846 1103 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 SPAG1Q07617 926 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 RBM43Q6ZSC3 357 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 CCDC114Q96M63 670 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 BIN2Q9UBW5 565 aaPredicted RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 ZC3H13Q5T200 1668 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 SETBP1Q9Y6X0 1596 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 TTC26A0AVF1 554 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 PDE8BO95263 885 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 BMP6P22004 513 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 RBM5P52756 815 aaKnown RBP eCLIP11.3□□□□□ -0.6
PALB2-201ENST00000261584 ADCY1Q08828 1119 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 E2F5Q15329 346 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 FBXW10Q5XX13 1052 aa11.3□□□□□ -0.6
PALB2-201ENST00000261584 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 MRRFQ96E11 262 aaKnown RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 TEX13AQ9BXU3 409 aaPredicted RBP11.3□□□□□ -0.6
PALB2-201ENST00000261584 E7EVH7 732 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 RPN1P04843 607 aaKnown RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 TFAP4Q01664 338 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 TBC1D10BQ4KMP7 808 aaPredicted RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 FUT8Q9BYC5 575 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 PPP6R2O75170 966 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 NDUFA10O95299 355 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 EHHADHQ08426 723 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 LY9Q9HBG7 655 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 JRKLQ9Y4A0 524 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 TUBB4AP04350 444 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 IL2RBP14784 551 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 VAV2P52735 878 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 MAPKAPK5Q8IW41 473 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 CRACR2BQ8N4Y2 399 aaPredicted RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 TTLL11Q8NHH1 800 aa11.29□□□□□ -0.6
PALB2-201ENST00000261584 STRBPQ96SI9 672 aaKnown RBP11.29□□□□□ -0.6
PALB2-201ENST00000261584 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 H7C1W4 665 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 CEP104O60308 925 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 CTSWP56202 376 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 PAIP2Q9BPZ3 127 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 AGPAT5Q9NUQ2 364 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 LOC102724159A0A0B4J2E5 919 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 PTPREP23469 700 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 EZH2Q15910 746 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 TSGA10IPQ3SY00 556 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 CTNNBL1Q8WYA6 563 aaPredicted RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 TUBGCP2Q9BSJ2 902 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 INTS13Q9NVM9 706 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 PRCPP42785 496 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 IFT88Q13099 833 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 NFRKBQ6P4R8 1299 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
PALB2-201ENST00000261584 RMND1Q9NWS8 449 aa11.28□□□□□ -0.6
PALB2-201ENST00000261584 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.6
PALB2-201ENST00000261584 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms