RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PDE11AQ9HCR9 933 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 AFF2P51816 1311 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 IRS2Q9Y4H2 1338 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 TNRC6CQ9HCJ0 1690 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 LDHCP07864 332 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 PDE4BQ07343 736 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 GOLGA8FQ08AF8 430 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 GOLGA8DPQ0D2H9 430 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 NFIXQ14938 502 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 SHC4Q6S5L8 630 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 FAM196AQ6ZSG2 479 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 DZIP1Q86YF9 867 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 PDILTQ8N807 584 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 MLKLQ8NB16 471 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 CERKQ8TCT0 537 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 MED4Q9NPJ6 270 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 GEMIN8Q9NWZ8 242 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 KIF5CO60282 957 aa12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 PNOCQ13519 176 aa12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 PTPAQ15257 358 aa12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 TTC31Q49AM3 519 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 CT47A1Q5JQC4 288 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 METTL16Q86W50 562 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 AMOTL1Q8IY63 956 aa12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHRNA1-201ENST00000261007 BAG3O95817 575 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 ATP2B4P23634 1241 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 GTF2A1P52655 376 aaPredicted RBP12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 CORO7P57737 925 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 NR1I3Q14994 352 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 NT5DC1Q5TFE4 455 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 NUP133Q8WUM0 1156 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 PPM1EQ8WY54 764 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 AIFM3Q96NN9 605 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 TFCP2L1Q9NZI6 479 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 PCDHA5Q9Y5H7 936 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.45
CHRNA1-201ENST00000261007 USP17L12C9JPN9 530 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 AKR1B15C9JRZ8 316 aaPredicted RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 USP17L21D6R901 530 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 BMP15O95972 392 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 LDHBP07195 334 aaKnown RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 ADKP55263 362 aaKnown RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 MCM6Q14566 821 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 CNNM3Q8NE01 707 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 ZNF384Q8TF68 577 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 RBM17Q96I25 401 aaKnown RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 MAP3K14Q99558 947 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 ZKSCAN3Q9BRR0 538 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 VIPAS39Q9H9C1 493 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 MRPL44Q9H9J2 332 aaKnown RBP12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.46
CHRNA1-201ENST00000261007 BAZ2AQ9UIF9 1905 aaKnown RBP12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 CPP00450 1065 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 GUCY2CP25092 1073 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 KLRK1P26718 216 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 WHAMMP3Q1A5X7 153 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 CRY2Q49AN0 593 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 ABCB6Q9NP58 842 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 GJB4Q9NTQ9 266 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 FAN1Q9Y2M0 1017 aa12.2□□□□□ -0.46
CHRNA1-201ENST00000261007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 BBOX1O75936 387 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 PRDX5P30044 214 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 LONRF3Q496Y0 759 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 RASGRP2Q7LDG7 609 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 CTCFLQ8NI51 663 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 PNKPQ96T60 521 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 AATFQ9NY61 560 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 MYO1AQ9UBC5 1043 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 MYH6P13533 1939 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms