RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 MORC3Q14149 939 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 GGA1Q9UJY5 639 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 IKBKBO14920 756 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
CAB39-201ENST00000258418 INTS5Q6P9B9 1019 aaKnown RBP16.56■□□□□ 0.24
CAB39-201ENST00000258418 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 PKD2L1Q9P0L9 805 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 CTAGE15A4D2H0 777 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 CTAGE8P0CG41 777 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 KCNJ12Q14500 433 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 CTAGE6Q86UF2 777 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 CTAGE4Q8IX94 777 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 HPS3Q969F9 1004 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 CRACR2AQ9BSW2 395 aa16.56■□□□□ 0.24
CAB39-201ENST00000258418 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
CAB39-201ENST00000258418 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 LRRC41Q15345 812 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 CABP7Q86V35 215 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 WDR66Q8TBY9 1149 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 AGXT2Q9BYV1 514 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 CTDP1Q9Y5B0 961 aaPredicted RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 GOLGA6L9A6NEM1 432 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 ZMYND10O75800 440 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 PLS1Q14651 629 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 DHX37Q8IY37 1157 aaKnown RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 FBXO2Q9UK22 296 aaPredicted RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 LTN1O94822 1766 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 SLFN14P0C7P3 912 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 NFIXQ14938 502 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 USH1GQ495M9 461 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 DNAJC21Q5F1R6 531 aaKnown RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
CAB39-201ENST00000258418 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
CAB39-201ENST00000258418 SPAG1Q07617 926 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 KMT5BQ4FZB7 885 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 KIAA0825Q8IV33 1275 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 CNGA4Q8IV77 575 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 NTSR2O95665 410 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 RPN1P04843 607 aaKnown RBP16.54■□□□□ 0.24
CAB39-201ENST00000258418 GYS2P54840 703 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 PTPAQ15257 358 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 DPP8Q6V1X1 898 aaPredicted RBP16.54■□□□□ 0.24
CAB39-201ENST00000258418 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 IL17RAQ96F46 866 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 WDR24Q96S15 920 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 ARPP21Q9UBL0 812 aaPredicted RBP16.54■□□□□ 0.24
CAB39-201ENST00000258418 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 NTRK3Q16288 839 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 CDCA7Q9BWT1 371 aaPredicted RBP16.54■□□□□ 0.24
CAB39-201ENST00000258418 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
CAB39-201ENST00000258418 SNAP25P60880 206 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
CAB39-201ENST00000258418 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 PIGSQ96S52 555 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■■■■ 63.7
CAB39-201ENST00000258418 LRWD1Q9UFC0 647 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 B4DLN1 442 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 TRAF5O00463 557 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 KRT79Q5XKE5 535 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 RBM43Q6ZSC3 357 aaKnown RBP16.53■□□□□ 0.24
CAB39-201ENST00000258418 SLC35F6Q8N357 371 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 RAB34Q9BZG1 259 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
CAB39-201ENST00000258418 AMPD3Q01432 767 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 FEZ1Q99689 392 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
CAB39-201ENST00000258418 GNA11P29992 359 aa16.52■□□□□ 0.24
CAB39-201ENST00000258418 NOP2P46087 812 aaKnown RBP16.52■□□□□ 0.24
CAB39-201ENST00000258418 CYP27A1Q02318 531 aa16.52■□□□□ 0.24
CAB39-201ENST00000258418 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
CAB39-201ENST00000258418 VPS18Q9P253 973 aa16.52■□□□□ 0.24
CAB39-201ENST00000258418 PRPF3O43395 683 aaKnown RBP16.52■□□□□ 0.23
CAB39-201ENST00000258418 CHMP2AO43633 222 aa16.52■□□□□ 0.23
CAB39-201ENST00000258418 REXO1Q8N1G1 1221 aaKnown RBP16.52■□□□□ 0.23
CAB39-201ENST00000258418 ZCCHC17Q9NP64 241 aaKnown RBP16.52■□□□□ 0.23
CAB39-201ENST00000258418 SALL1Q9NSC2 1324 aa16.52■□□□□ 0.23
CAB39-201ENST00000258418 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
CAB39-201ENST00000258418 CCDC66A2RUB6 948 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 CLCN6P51797 869 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 COPB1P53618 953 aaKnown RBP16.51■□□□□ 0.23
CAB39-201ENST00000258418 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 KCTD1Q719H9 257 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 GJA10Q969M2 543 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 NSUN4Q96CB9 384 aaKnown RBP16.51■□□□□ 0.23
CAB39-201ENST00000258418 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
CAB39-201ENST00000258418 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms