RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SUGT1Q9Y2Z0 365 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 GAS7O60861 476 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.27
UBE4B-201ENST00000253251 HOOK3Q86VS8 718 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 AK8Q96MA6 479 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 BAG1Q99933 345 aaPredicted RBP16.77■□□□□ 0.27
UBE4B-201ENST00000253251 CENPHQ9H3R5 247 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 MRVI1Q9Y6F6 885 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 CHMP2AO43633 222 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 TXNRD1Q16881 649 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 ARHGAP27Q6ZUM4 889 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 OTUD6AQ7L8S5 288 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 DNAI1Q9UI46 699 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 NOP56O00567 594 aaKnown RBP16.76■□□□□ 0.27
UBE4B-201ENST00000253251 STRN3Q13033 797 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 TUBB2AQ13885 445 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 IGSF22Q8N9C0 903 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 TUBB2BQ9BVA1 445 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
UBE4B-201ENST00000253251 SYNCQ9H7C4 482 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 PCDHA4Q9UN74 947 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 ZNF75DP51815 510 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 TIGD1Q96MW7 591 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 NFE2L3Q9Y4A8 694 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 UTYO14607 1347 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 PTGS1P23219 599 aa16.76■□□□□ 0.27
UBE4B-201ENST00000253251 CTNNBL1Q8WYA6 563 aaPredicted RBP16.76■□□□□ 0.27
UBE4B-201ENST00000253251 GTPBP6O43824 516 aaPredicted RBP16.75■□□□□ 0.27
UBE4B-201ENST00000253251 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
UBE4B-201ENST00000253251 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
UBE4B-201ENST00000253251 DBNDD1Q9H9R9 158 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 SERTAD1Q9UHV2 236 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 PCDHA12Q9UN75 941 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 GSTTP1A0A1W2PQM5 241 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 MYZAPP0CAP1 466 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 WDR44Q5JSH3 913 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 H0YCG3 227 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 PRKAB2O43741 272 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 STX10O60499 249 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 FAM193AP78312 1265 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 KIAA0753Q2KHM9 967 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 ZSWIM5Q9P217 1185 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 PCDHA1Q9Y5I3 950 aa16.75■□□□□ 0.27
UBE4B-201ENST00000253251 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
UBE4B-201ENST00000253251 ACTN2P35609 894 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
UBE4B-201ENST00000253251 SP8Q8IXZ3 490 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 KIFAP3Q92845 792 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 FRMPD2Q68DX3 1309 aaPredicted RBP16.74■□□□□ 0.27
UBE4B-201ENST00000253251 TMEM232C9JQI7 657 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 CSF1RP07333 972 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 INF2Q27J81 1249 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 KRBA2Q6ZNG9 492 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 CD209Q9NNX6 404 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 RIPOR2Q9Y4F9 1068 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 RRP9O43818 475 aaKnown RBP16.74■□□□□ 0.27
UBE4B-201ENST00000253251 DNA2P51530 1060 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 DHX37Q8IY37 1157 aaKnown RBP16.74■□□□□ 0.27
UBE4B-201ENST00000253251 GOLGA5Q8TBA6 731 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 TMEM63CQ9P1W3 806 aa16.74■□□□□ 0.27
UBE4B-201ENST00000253251 H0YHG0 523 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 SP4Q02446 784 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 IFFO1Q0D2I5 559 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 CRAMP1Q96RY5 1269 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 PIM2Q9P1W9 311 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 CCDC169A6NNP5 214 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 DNM2P50570 870 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 HLTFQ14527 1009 aaKnown RBP eCLIP16.73■□□□□ 0.27
UBE4B-201ENST00000253251 DCAF17Q5H9S7 520 aaPredicted RBP16.73■□□□□ 0.27
UBE4B-201ENST00000253251 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 TMTC1Q8IUR5 882 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 MARCH10Q8NA82 808 aaPredicted RBP16.73■□□□□ 0.27
UBE4B-201ENST00000253251 VTI1AQ96AJ9 217 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 CCDC51Q96ER9 411 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 KCNQ2O43526 872 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
UBE4B-201ENST00000253251 DRC1Q96MC2 740 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 RASAL2Q9UJF2 1139 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 RCOR1Q9UKL0 485 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 MACROD2A1Z1Q3 448 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 NELFBQ8WX92 580 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 SH3GLB2Q9NR46 395 aa16.73■□□□□ 0.27
UBE4B-201ENST00000253251 DDX25Q9UHL0 483 aaKnown RBP16.73■□□□□ 0.27
UBE4B-201ENST00000253251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.73■□□□□ 0.275e-7■■■□□ 16
UBE4B-201ENST00000253251 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 SLU7O95391 586 aaKnown RBP16.72■□□□□ 0.27
UBE4B-201ENST00000253251 MYL1P05976 194 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 KIF23Q02241 960 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-201ENST00000253251 GPR162Q16538 588 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms