RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 DAGLBQ8NCG7 672 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 RASSF8Q8NHQ8 419 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 SMARCC1Q92922 1105 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC102AQ96A19 550 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 TCP11L1Q9NUJ3 509 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 MINPP1Q9UNW1 487 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 RASSF10A6NK89 507 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 PCP11498 1178 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 CHRNDQ07001 517 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 UBE4AQ14139 1066 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 POTEDQ86YR6 584 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 FAM177A1Q8N128 213 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 MSL3Q8N5Y2 521 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 OLIG1Q8TAK6 271 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 FAM71BQ8TC56 605 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 NOC3LQ8WTT2 800 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 RUBCNQ92622 972 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 LOXHD1Q8IVV2 1947 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 KLF18A0A0U1RQI7 1052 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 ANKRD18BA2A2Z9 1011 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 POLR3GO15318 223 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 ERCC5P28715 1186 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 CYLC1P35663 651 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 LMAN1P49257 510 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 FMR1Q06787 632 aaKnown RBP eCLIP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 CNNM4Q6P4Q7 775 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 IRF2BP1Q8IU81 584 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 TSGA10Q9BZW7 698 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 ZRANB2O95218 330 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GNAT2P19087 354 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CHMP4BP1P59074 171 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 SMC1AQ14683 1233 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 LONRF3Q496Y0 759 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 TTC31Q49AM3 519 aaPredicted RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 SPECC1LQ69YQ0 1117 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 TYW1BQ6NUM6 668 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 KIF6Q6ZMV9 814 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 LRRN4CLQ8ND94 238 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CRYGNQ8WXF5 182 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 ALG1Q9BT22 464 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 RNF26Q9BY78 433 aaPredicted RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 XPO4Q9C0E2 1151 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 TTYH3Q9C0H2 523 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 SRPRBQ9Y5M8 271 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GAKO14976 1311 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 XDHP47989 1333 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GOLGA6L10A6NI86 522 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GOLGA8AA7E2F4 631 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 FOXN1O15353 648 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 KCNQ2O43526 872 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 SLC9C2Q5TAH2 1124 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 AATFQ9NY61 560 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 ARID2Q68CP9 1835 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 A0A1B0GTH6 734 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 PRPF3O43395 683 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 KLRC4O43908 158 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CD44P16070 742 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 FOSBP53539 338 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 PPP4CP60510 307 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CCT2P78371 535 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 NR1I3Q14994 352 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GBP6Q6ZN66 633 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 TXNRD3Q86VQ6 643 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 NOSTRINQ8IVI9 506 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 VSTM4Q8IW00 320 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 AMOTL1Q8IY63 956 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 OXER1Q8TDS5 423 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 FAM163AQ96GL9 167 aaPredicted RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 NAPGQ99747 312 aaPredicted RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 PPP1R3GB7ZBB8 358 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 UBAP1LF5GYI3 381 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 ZBTB43O43298 467 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 PNMA6AP0CW24 399 aaPredicted RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CALM1P0DP23 149 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CALM2P0DP24 149 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CALM3P0DP25 149 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 SNHG28P0DPA3 235 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 BCAMP50895 628 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 ZSCAN26Q16670 478 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 KRBA2Q6ZNG9 492 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 USP49Q70CQ1 688 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 TC2NQ8N9U0 490 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 PANX2Q96RD6 677 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 SLC12A7Q9Y666 1083 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 WDR90Q96KV7 1748 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GOLGA6L7A0A1B0GV03 622 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 FAM205CA6NFA0 338 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 H0YHG0 523 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CAPN2P17655 700 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 OAS2P29728 719 aaKnown RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CYP2C19P33261 490 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 APBA1Q02410 837 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 MAPK8IP2Q13387 824 aaPredicted RBP4.68□□□□□ -1.66
UBE4A-201ENST00000252108 GRIK5Q16478 980 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 FBXO38Q6PIJ6 1188 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 LDHAL6AQ6ZMR3 332 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 B4GALNT4Q76KP1 1039 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 NUP58Q9BVL2 599 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 CARD6Q9BX69 1037 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 RAI14Q9P0K7 980 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms