RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MORC3Q14149 939 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 IL17AQ16552 155 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 CREBRFQ8IUR6 639 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 CCAR2Q8N163 923 aaKnown RBP17.93■□□□□ 0.46
LRFN1-201ENST00000248668 INTS13Q9NVM9 706 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 CRY2Q49AN0 593 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 DGKHQ86XP1 1220 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 BLIDQ8IZY5 108 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 SLURP2P0DP57 97 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 IMPACTQ9P2X3 320 aa17.93■□□□□ 0.46
LRFN1-201ENST00000248668 TOP1P11387 765 aaKnown RBP17.92■□□□□ 0.46
LRFN1-201ENST00000248668 SARSP49591 514 aaKnown RBP17.92■□□□□ 0.46
LRFN1-201ENST00000248668 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
LRFN1-201ENST00000248668 INF2Q27J81 1249 aa17.92■□□□□ 0.46
LRFN1-201ENST00000248668 TMEM51Q9NW97 253 aa17.92■□□□□ 0.46
LRFN1-201ENST00000248668 PP2D1A8MPX8 630 aa17.92■□□□□ 0.46
LRFN1-201ENST00000248668 CD44P16070 742 aaKnown RBP17.92■□□□□ 0.46
LRFN1-201ENST00000248668 FLT1P17948 1338 aa17.92■□□□□ 0.46
LRFN1-201ENST00000248668 ATP2C1P98194 919 aaPredicted RBP17.92■□□□□ 0.46
LRFN1-201ENST00000248668 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
LRFN1-201ENST00000248668 SLFN14P0C7P3 912 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 ADRA2BP18089 450 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 SCNN1DP51172 638 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 CCDC150Q8NCX0 1101 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 RASSF8Q8NHQ8 419 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 FERMT2Q96AC1 680 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 MAPK8IP1Q9UQF2 711 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 CCDC194A0A1B0GVG4 234 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 POLRMTO00411 1230 aaKnown RBP17.91■□□□□ 0.46
LRFN1-201ENST00000248668 PPP4CP60510 307 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 ZNF771Q7L3S4 317 aaPredicted RBP17.91■□□□□ 0.46
LRFN1-201ENST00000248668 CERS3Q8IU89 383 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 UBA5Q9GZZ9 404 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.91■□□□□ 0.46
LRFN1-201ENST00000248668 V9GYY5 206 aaPredicted RBP17.91■□□□□ 0.46
LRFN1-201ENST00000248668 KIAA1551Q9HCM1 1747 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 KLRF2D3W0D1 207 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 GRM4Q14833 912 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 MLKLQ8NB16 471 aa17.91■□□□□ 0.46
LRFN1-201ENST00000248668 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
LRFN1-201ENST00000248668 MSL1Q68DK7 614 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 KANK3Q6NY19 840 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 CCDC112Q8NEF3 446 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 CERKQ8TCT0 537 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 CEP95Q96GE4 821 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 GTPBP4Q9BZE4 634 aaKnown RBP17.9■□□□□ 0.46
LRFN1-201ENST00000248668 CBFA2T2O43439 604 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 KARSQ15046 597 aaKnown RBP17.9■□□□□ 0.46
LRFN1-201ENST00000248668 PROM2Q8N271 834 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 IPO4Q8TEX9 1081 aaKnown RBP17.9■□□□□ 0.46
LRFN1-201ENST00000248668 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
LRFN1-201ENST00000248668 KRT27Q7Z3Y8 459 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 PCDHA4Q9UN74 947 aa17.9■□□□□ 0.46
LRFN1-201ENST00000248668 FRMPD2Q68DX3 1309 aaPredicted RBP17.89■□□□□ 0.45
LRFN1-201ENST00000248668 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 RHBDL3P58872 404 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 TXNRD1Q16881 649 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 NT5DC1Q5TFE4 455 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 VSTM4Q8IW00 320 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 TMEM60Q9H2L4 133 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 PPEF1O14829 653 aaPredicted RBP17.89■□□□□ 0.45
LRFN1-201ENST00000248668 BBOX1O75936 387 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 KIF20AO95235 890 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 IL1R1P14778 569 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 CUL4BQ13620 913 aa17.89■□□□□ 0.45
LRFN1-201ENST00000248668 LY75O60449 1722 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 FAM177A1Q8N128 213 aaPredicted RBP17.88■□□□□ 0.45
LRFN1-201ENST00000248668 LRRC47Q8N1G4 583 aaKnown RBP17.88■□□□□ 0.45
LRFN1-201ENST00000248668 DAGLAQ9Y4D2 1042 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
LRFN1-201ENST00000248668 BMP15O95972 392 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 CALML3P27482 149 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.45
LRFN1-201ENST00000248668 NAPAP54920 295 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 PPP1R13BQ96KQ4 1090 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 DACH1Q9UI36 760 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 LAMB1P07942 1786 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 DPYDQ12882 1025 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
LRFN1-201ENST00000248668 CPLX3Q8WVH0 158 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 CCDC34Q96HJ3 373 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 MTRQ99707 1265 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 TMX1Q9H3N1 280 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 CTNND2Q9UQB3 1225 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
LRFN1-201ENST00000248668 ATP2B2Q01814 1243 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 ENOX1Q8TC92 643 aaKnown RBP17.87■□□□□ 0.45
LRFN1-201ENST00000248668 USP17L5A8MUK1 530 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 TEX33O43247 280 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 RAD21O60216 631 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 C16orf86Q6ZW13 317 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 STXBP3O00186 592 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 NRDCO43847 1150 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 PARP1P09874 1014 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms