RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 DDR1Q08345 913 aa27.31■■□□□ 1.96
GDF1-201ENST00000247005 DPYDQ12882 1025 aa27.31■■□□□ 1.96
GDF1-201ENST00000247005 WWC2Q6AWC2 1192 aa27.31■■□□□ 1.96
GDF1-201ENST00000247005 RBM17Q96I25 401 aaKnown RBP27.31■■□□□ 1.96
GDF1-201ENST00000247005 HEATR3Q7Z4Q2 680 aa27.31■■□□□ 1.96
GDF1-201ENST00000247005 ANKS1AQ92625 1134 aa27.31■■□□□ 1.96
GDF1-201ENST00000247005 C6orf229H3BNL8 230 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 ADRA2BP18089 450 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 C15orf52Q6ZUT6 534 aaKnown RBP27.3■■□□□ 1.96
GDF1-201ENST00000247005 KCND1Q9NSA2 647 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 ROBO3Q96MS0 1386 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 ATP2B4P23634 1241 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 CDK8P49336 464 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 TBC1D16Q8TBP0 767 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 PCDHA4Q9UN74 947 aa27.3■■□□□ 1.96
GDF1-201ENST00000247005 IL1R1P14778 569 aa27.29■■□□□ 1.96
GDF1-201ENST00000247005 MTRQ99707 1265 aa27.29■■□□□ 1.96
GDF1-201ENST00000247005 ZBTB22O15209 634 aa27.29■■□□□ 1.96
GDF1-201ENST00000247005 ONECUT3O60422 494 aaPredicted RBP27.29■■□□□ 1.96
GDF1-201ENST00000247005 NCBP1Q09161 790 aaKnown RBP27.29■■□□□ 1.96
GDF1-201ENST00000247005 E2F4Q16254 413 aa27.29■■□□□ 1.96
GDF1-201ENST00000247005 GPR75-ASB3A0A0A6YYF3 556 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 C4orf32Q8N8J7 132 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 EYA3Q99504 573 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 FLT1P17948 1338 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 RIMBP2O15034 1052 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 CALML3P27482 149 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 TRAPPC10P48553 1259 aa27.28■■□□□ 1.96
GDF1-201ENST00000247005 ADKP55263 362 aaKnown RBP27.28■■□□□ 1.96
GDF1-201ENST00000247005 MYO1BO43795 1136 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 TRIM37O94972 964 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 PCDHA6Q9UN73 950 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 PCDHA8Q9Y5H6 950 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 NRDCO43847 1150 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 RHBDL3P58872 404 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 CUL4BQ13620 913 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 INF2Q27J81 1249 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 CCDC34Q96HJ3 373 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 TMX1Q9H3N1 280 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 TCP11L1Q9NUJ3 509 aa27.27■■□□□ 1.96
GDF1-201ENST00000247005 ERCC5P28715 1186 aaPredicted RBP27.26■■□□□ 1.95
GDF1-201ENST00000247005 USP17L2Q6R6M4 530 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 SYT10Q6XYQ8 523 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 MTERF4Q7Z6M4 381 aaKnown RBP27.26■■□□□ 1.95
GDF1-201ENST00000247005 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.26■■□□□ 1.95
GDF1-201ENST00000247005 V9GYY5 206 aaPredicted RBP27.26■■□□□ 1.95
GDF1-201ENST00000247005 PALM3A6NDB9 673 aaPredicted RBP27.26■■□□□ 1.95
GDF1-201ENST00000247005 PP2D1A8MPX8 630 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 PPP1R3GB7ZBB8 358 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 KLRF2D3W0D1 207 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 F8W031 263 aaPredicted RBP27.26■■□□□ 1.95
GDF1-201ENST00000247005 TEX33O43247 280 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 HOMER1Q86YM7 354 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 IQUBQ8NA54 791 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 KIF18AQ8NI77 898 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 TMEM60Q9H2L4 133 aa27.26■■□□□ 1.95
GDF1-201ENST00000247005 NAV1Q8NEY1 1877 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 CCDC194A0A1B0GVG4 234 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 PSDA5PKW4 1024 aaPredicted RBP27.25■■□□□ 1.95
GDF1-201ENST00000247005 M0R2N6 131 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 GTF2IP78347 998 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 PDXDC2PQ6P474 469 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 ANKRD7Q92527 254 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 GSDMAQ96QA5 445 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 STXBP3O00186 592 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 BBOX1O75936 387 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 TBX2Q13207 712 aaPredicted RBP27.25■■□□□ 1.95
GDF1-201ENST00000247005 KARSQ15046 597 aaKnown RBP27.25■■□□□ 1.95
GDF1-201ENST00000247005 C16orf86Q6ZW13 317 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 TMEM139Q8IV31 216 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 VAT1LQ9HCJ6 419 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 SH3GLB2Q9NR46 395 aa27.25■■□□□ 1.95
GDF1-201ENST00000247005 SYNRGQ9UMZ2 1314 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 UBR3Q6ZT12 1888 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 POLRMTO00411 1230 aaKnown RBP27.24■■□□□ 1.95
GDF1-201ENST00000247005 GNAQP50148 359 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 ZNF215Q9UL58 517 aaPredicted RBP27.24■■□□□ 1.95
GDF1-201ENST00000247005 TRPC5Q9UL62 973 aaPredicted RBP27.24■■□□□ 1.95
GDF1-201ENST00000247005 SNED1Q8TER0 1413 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 HSPA1LP34931 641 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 SPECC1LQ69YQ0 1117 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 CEP95Q96GE4 821 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 PLIN2Q99541 437 aa27.24■■□□□ 1.95
GDF1-201ENST00000247005 PICALMQ13492 652 aa27.23■■□□□ 1.95
GDF1-201ENST00000247005 BARHL2Q9NY43 387 aa27.23■■□□□ 1.95
GDF1-201ENST00000247005 NR1I3Q14994 352 aa27.23■■□□□ 1.95
GDF1-201ENST00000247005 SPATA1Q5VX52 437 aa27.23■■□□□ 1.95
GDF1-201ENST00000247005 CTNND2Q9UQB3 1225 aa27.23■■□□□ 1.95
GDF1-201ENST00000247005 CCDC178Q5BJE1 867 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 APTXQ7Z2E3 356 aaKnown RBP27.22■■□□□ 1.95
GDF1-201ENST00000247005 PDCL2Q8N4E4 241 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 TC2NQ8N9U0 490 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 MXD3Q9BW11 206 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 MAPK8IP1Q9UQF2 711 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 KCNJ6P48051 423 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 QTRT2Q9H974 415 aaKnown RBP27.22■■□□□ 1.95
GDF1-201ENST00000247005 PODXL2Q9NZ53 605 aa27.22■■□□□ 1.95
GDF1-201ENST00000247005 DHX8Q14562 1220 aaKnown RBP27.21■■□□□ 1.95
GDF1-201ENST00000247005 PPP4R3BQ5MIZ7 849 aa27.21■■□□□ 1.95
GDF1-201ENST00000247005 CDK5RAP2Q96SN8 1893 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms