RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 DAGLAQ9Y4D2 1042 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
DDX49-201ENST00000247003 FOXN1O15353 648 aa17.23■□□□□ 0.35
DDX49-201ENST00000247003 APBA3O96018 575 aa17.23■□□□□ 0.35
DDX49-201ENST00000247003 PARP1P09874 1014 aaKnown RBP17.23■□□□□ 0.35
DDX49-201ENST00000247003 TXLNAP40222 546 aa17.23■□□□□ 0.35
DDX49-201ENST00000247003 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 SLFN14P0C7P3 912 aa17.22■□□□□ 0.35
DDX49-201ENST00000247003 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
DDX49-201ENST00000247003 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 MCM7P33993 719 aa17.22■□□□□ 0.35
DDX49-201ENST00000247003 PICALMQ13492 652 aa17.22■□□□□ 0.35
DDX49-201ENST00000247003 TMC6Q7Z403 805 aa17.22■□□□□ 0.35
DDX49-201ENST00000247003 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 SPZ1Q9BXG8 430 aa17.22■□□□□ 0.35
DDX49-201ENST00000247003 OSBPL5Q9H0X9 879 aaPredicted RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 SEC63Q9UGP8 760 aaKnown RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 COL11A2P13942 1736 aaPredicted RBP17.22■□□□□ 0.35
DDX49-201ENST00000247003 KLRF2D3W0D1 207 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
DDX49-201ENST00000247003 FOXP4Q8IVH2 680 aaPredicted RBP17.21■□□□□ 0.35
DDX49-201ENST00000247003 DAGLBQ8NCG7 672 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 MYH8P13535 1937 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 F8W031 263 aaPredicted RBP17.21■□□□□ 0.35
DDX49-201ENST00000247003 SKILP12757 684 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 SARSP49591 514 aaKnown RBP17.21■□□□□ 0.35
DDX49-201ENST00000247003 UBASH3AP57075 661 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 MORC3Q14149 939 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.35
DDX49-201ENST00000247003 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
DDX49-201ENST00000247003 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
DDX49-201ENST00000247003 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDX49-201ENST00000247003 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
DDX49-201ENST00000247003 CT47A1Q5JQC4 288 aaPredicted RBP17.2■□□□□ 0.34
DDX49-201ENST00000247003 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
DDX49-201ENST00000247003 IQUBQ8NA54 791 aa17.2■□□□□ 0.34
DDX49-201ENST00000247003 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
DDX49-201ENST00000247003 PLIN4Q96Q06 1357 aa17.2■□□□□ 0.34
DDX49-201ENST00000247003 WNT7AO00755 349 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 MMP10P09238 476 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 LONP1P36776 959 aaKnown RBP17.19■□□□□ 0.34
DDX49-201ENST00000247003 AFMP43652 599 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 NAPAP54920 295 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 SOGA3Q5TF21 947 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 MYRIPQ8NFW9 859 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 CEP95Q96GE4 821 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 BAZ2BQ9UIF8 2168 aaKnown RBP17.19■□□□□ 0.34
DDX49-201ENST00000247003 STXBP3O00186 592 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 ATP1A3P13637 1013 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 SMARCA1P28370 1054 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 SPATA20Q8TB22 786 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 PAGE5Q96GU1 130 aa17.19■□□□□ 0.34
DDX49-201ENST00000247003 TNS1Q9HBL0 1735 aaKnown RBP17.19■□□□□ 0.34
DDX49-201ENST00000247003 CYTH3O43739 400 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 HLA-DOAP06340 250 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
DDX49-201ENST00000247003 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
DDX49-201ENST00000247003 ERCC5P28715 1186 aaPredicted RBP17.18■□□□□ 0.34
DDX49-201ENST00000247003 GNA11P29992 359 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 ENOX1Q8TC92 643 aaKnown RBP17.18■□□□□ 0.34
DDX49-201ENST00000247003 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 C16orf45Q96MC5 204 aaPredicted RBP17.18■□□□□ 0.34
DDX49-201ENST00000247003 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 C6orf50Q9HD87 102 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 FANCLQ9NW38 375 aa17.18■□□□□ 0.34
DDX49-201ENST00000247003 A0A087X0B3 334 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 hCG_1984214I3L0E3 225 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 LAD1O00515 517 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 BMP6P22004 513 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 CCZ1BP86790 482 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 CCZ1P86791 482 aaPredicted RBP17.17■□□□□ 0.34
DDX49-201ENST00000247003 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 ZNF713Q8N859 430 aaPredicted RBP17.17■□□□□ 0.34
DDX49-201ENST00000247003 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX49-201ENST00000247003 HSD3B7Q9H2F3 369 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 PCDHA6Q9UN73 950 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 NFE2L3Q9Y4A8 694 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 PCDHA8Q9Y5H6 950 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 KRT25Q7Z3Z0 450 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 SH3RF1Q7Z6J0 888 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 USP40Q9NVE5 1235 aa17.17■□□□□ 0.34
DDX49-201ENST00000247003 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 PPP4R3BQ5MIZ7 849 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms