RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 TSNAXIP1Q2TAA8 658 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 PCDHB13Q9Y5F0 798 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 BAG3O95817 575 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 BRD3Q15059 726 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 HP1BP3Q5SSJ5 553 aaPredicted RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 EPB41L5Q9HCM4 733 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 ATP8A1Q9Y2Q0 1164 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 NPATQ14207 1427 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 PLCD1P51178 756 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 IRX4P78413 519 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 CEP128Q6ZU80 1094 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 RP1L1Q8IWN7 2480 aaPredicted RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 CYP4F22Q6NT55 531 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 ANGEL1Q9UNK9 670 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 NUMA1Q14980 2115 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 RPN1P04843 607 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 ITIH3Q06033 890 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 TBC1D1Q86TI0 1168 aaPredicted RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 BZW2Q9Y6E2 419 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 ALDH1L1O75891 902 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 PIK3R5Q8WYR1 880 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 EAF2Q96CJ1 260 aaPredicted RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 EFCAB8A8MWE9 144 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 PRR29P0C7W0 189 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 COPB1P53618 953 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 CSRNP2Q9H175 543 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 HYOU1Q9Y4L1 999 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 EPB41P11171 864 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 SERPINB6P35237 376 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 ZCRB1Q8TBF4 217 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 ATP2A1O14983 1001 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 KRT19P08727 400 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 FAM71BQ8TC56 605 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.3□□□□□ -1.08
RIF1-201ENST00000243326 IL1RL1Q01638 556 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 ZNF449Q6P9G9 518 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 GOLGA8KD6RF30 607 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 PPFIA2O75334 1257 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 RASSF2P50749 326 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 MRPL46Q9H2W6 279 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 PROSER3Q2NL68 480 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 ARHGAP25P42331 645 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 CCDC62Q6P9F0 684 aa8.3□□□□□ -1.08
RIF1-201ENST00000243326 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
RIF1-201ENST00000243326 STXBP4Q6ZWJ1 553 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 CXorf38Q8TB03 319 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 ST5P78524 1137 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 TERF2Q15554 542 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 CALCRLQ16602 461 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 ICE1Q9Y2F5 2266 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 FBXW10Q5XX13 1052 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 TGFBRAP1Q8WUH2 860 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 CCDC172P0C7W6 258 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 ATF7P17544 494 aaPredicted RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 ADCY8P40145 1251 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 CFAP61Q8NHU2 1237 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 KIFC2Q96AC6 838 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 MRPL44Q9H9J2 332 aaKnown RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 MLXIPQ9HAP2 919 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 LRRC47Q8N1G4 583 aaKnown RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 MX2P20592 715 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 NSD2O96028 1365 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 CYP2D7A0A087X1C5 515 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 TAF11Q15544 211 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 PCDHA5Q9Y5H7 936 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 LDHBP07195 334 aaKnown RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 CLUL1Q15846 466 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 WHAMMP3Q1A5X7 153 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 CNNM4Q6P4Q7 775 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 KIAA0586Q9BVV6 1533 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 EXOC5O00471 708 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 NBPF14Q5TI25 921 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 ADAM33Q9BZ11 813 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 SMARCAL1Q9NZC9 954 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 PIK3C2GO75747 1445 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 SRGAP1Q7Z6B7 1085 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 SREK1Q8WXA9 508 aaKnown RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 MRC2Q9UBG0 1479 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 HEXIM1O94992 359 aaKnown RBP8.29□□□□□ -1.08
RIF1-201ENST00000243326 GPBP1Q86WP2 473 aa8.29□□□□□ -1.08
RIF1-201ENST00000243326 TPH2Q8IWU9 490 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 CNOT6LQ96LI5 555 aaKnown RBP8.28□□□□□ -1.08
RIF1-201ENST00000243326 PFDN1O60925 122 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
RIF1-201ENST00000243326 MESDQ14696 234 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 DYDC2Q96IM9 177 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 TRPM2O94759 1503 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 XAB2Q9HCS7 855 aaKnown RBP8.28□□□□□ -1.08
RIF1-201ENST00000243326 PACSIN2Q9UNF0 486 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms