RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CFAP100Q494V2 611 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 TBC1D10BQ4KMP7 808 aaPredicted RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 CC2D1AQ6P1N0 951 aaPredicted RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 DZIP1Q86YF9 867 aaKnown RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 MLKLQ8NB16 471 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 ENOX1Q8TC92 643 aaKnown RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 NSUN4Q96CB9 384 aaKnown RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 MYOZ2Q9NPC6 264 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 GPHNQ9NQX3 736 aaPredicted RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 ST7Q9NRC1 585 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 INTS13Q9NVM9 706 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 DACH1Q9UI36 760 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 EPHX2P34913 555 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 SGMS1Q86VZ5 419 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 KIFC2Q96AC6 838 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 TMEM87BQ96K49 555 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 TAF1DQ9H5J8 278 aaPredicted RBP23.37■■□□□ 1.33
SNX3-201ENST00000230085 SH2B2O14492 632 aaPredicted RBP23.36■■□□□ 1.33
SNX3-201ENST00000230085 ZNF213O14771 459 aa23.36■■□□□ 1.33
SNX3-201ENST00000230085 URI1O94763 535 aaPredicted RBP23.36■■□□□ 1.33
SNX3-201ENST00000230085 SARSP49591 514 aaKnown RBP23.36■■□□□ 1.33
SNX3-201ENST00000230085 KRT40Q6A162 431 aa23.36■■□□□ 1.33
SNX3-201ENST00000230085 ZNF784Q8NCA9 323 aaPredicted RBP23.36■■□□□ 1.33
SNX3-201ENST00000230085 TRPM4Q8TD43 1214 aa23.36■■□□□ 1.33
SNX3-201ENST00000230085 BAG1Q99933 345 aaPredicted RBP23.36■■□□□ 1.33
SNX3-201ENST00000230085 ALG1Q9BT22 464 aa23.36■■□□□ 1.33
SNX3-201ENST00000230085 CARD6Q9BX69 1037 aa23.36■■□□□ 1.33
SNX3-201ENST00000230085 ADARB2Q9NS39 739 aaKnown RBP23.36■■□□□ 1.33
SNX3-201ENST00000230085 TMEM51Q9NW97 253 aa23.36■■□□□ 1.33
SNX3-201ENST00000230085 CRKP46108 304 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 RBM5P52756 815 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNX3-201ENST00000230085 ZNF579Q8NAF0 562 aaKnown RBP23.35■■□□□ 1.33
SNX3-201ENST00000230085 HNRNPLLQ8WVV9 542 aaKnown RBP23.35■■□□□ 1.33
SNX3-201ENST00000230085 SERPINA10Q9UK55 444 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 DOCK2Q92608 1830 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 MYH2Q9UKX2 1941 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 CCDC151A5D8V7 595 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 HIRAP54198 1017 aaPredicted RBP23.35■■□□□ 1.33
SNX3-201ENST00000230085 MAP3K12Q12852 859 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 BRD3Q15059 726 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 NTRK3Q16288 839 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 SPECC1LQ69YQ0 1117 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 TC2NQ8N9U0 490 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 TEKT1Q969V4 418 aa23.35■■□□□ 1.33
SNX3-201ENST00000230085 ADAMTSL1Q8N6G6 1762 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 CASQ1P31415 396 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 KIF4BQ2VIQ3 1234 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 PANX2Q96RD6 677 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 MRIQ9BWK5 157 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 NAA15Q9BXJ9 866 aaKnown RBP23.34■■□□□ 1.33
SNX3-201ENST00000230085 FANCLQ9NW38 375 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 KCNH3Q9ULD8 1083 aa23.34■■□□□ 1.33
SNX3-201ENST00000230085 WNT10BO00744 389 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 MMP14P50281 582 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 HDLBPQ00341 1268 aaKnown RBP23.33■■□□□ 1.33
SNX3-201ENST00000230085 GPS2Q13227 327 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 ALX1Q15699 326 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 SLC9C2Q5TAH2 1124 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 FOXP4Q8IVH2 680 aaPredicted RBP23.33■■□□□ 1.33
SNX3-201ENST00000230085 SPATA20Q8TB22 786 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 PRMT6Q96LA8 375 aaPredicted RBP23.33■■□□□ 1.33
SNX3-201ENST00000230085 PCDHA5Q9Y5H7 936 aa23.33■■□□□ 1.33
SNX3-201ENST00000230085 POTEB2H3BUK9 544 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 ERCC5P28715 1186 aaPredicted RBP23.32■■□□□ 1.32
SNX3-201ENST00000230085 TRDNQ13061 729 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 PNOCQ13519 176 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 DLGAP5Q15398 846 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 NBPF9Q3BBW0 867 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 EAPPQ56P03 285 aaPredicted RBP23.32■■□□□ 1.32
SNX3-201ENST00000230085 APOA5Q6Q788 366 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 HHIPL2Q6UWX4 724 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 KRI1Q8N9T8 703 aaKnown RBP23.32■■□□□ 1.32
SNX3-201ENST00000230085 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.32■■□□□ 1.32
SNX3-201ENST00000230085 NBPF3Q9H094 633 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 ARFGAP3Q9NP61 516 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.32■■□□□ 1.32
SNX3-201ENST00000230085 GPAA1O43292 621 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 POTEIP0CG38 1075 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 POTEJP0CG39 1038 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 LIFRP42702 1097 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 METAP2P50579 478 aaKnown RBP eCLIP23.32■■□□□ 1.32
SNX3-201ENST00000230085 IRX5P78411 483 aaPredicted RBP23.32■■□□□ 1.32
SNX3-201ENST00000230085 PPP2R3AQ06190 1150 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 KANK3Q6NY19 840 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 ADGRA1Q86SQ6 560 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 MTA3Q9BTC8 594 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.32■■□□□ 1.32
SNX3-201ENST00000230085 DAGLAQ9Y4D2 1042 aa23.32■■□□□ 1.32
SNX3-201ENST00000230085 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 MAP2K7O14733 419 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 BMP6P22004 513 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 FECHP22830 423 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 MARCKSP29966 332 aaPredicted RBP23.31■■□□□ 1.32
SNX3-201ENST00000230085 USP5P45974 858 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 RCAN1P53805 252 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 MORC3Q14149 939 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 USP50Q70EL3 339 aaPredicted RBP23.31■■□□□ 1.32
SNX3-201ENST00000230085 IQUBQ8NA54 791 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms