RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 CAPS2Q9BXY5 557 aa16.11■□□□□ 0.17
SFXN3-201ENST00000224807 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.11■□□□□ 0.17
SFXN3-201ENST00000224807 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 PLEKP08567 350 aaPredicted RBP16.1■□□□□ 0.17
SFXN3-201ENST00000224807 ARL8AQ96BM9 186 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 MED4Q9NPJ6 270 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 BCCIPQ9P287 314 aaKnown RBP eCLIP16.1■□□□□ 0.17
SFXN3-201ENST00000224807 REXO2Q9Y3B8 237 aaKnown RBP16.1■□□□□ 0.17
SFXN3-201ENST00000224807 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 ITGA6P23229 1130 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 IRAK1P51617 712 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 APTXQ7Z2E3 356 aaKnown RBP16.1■□□□□ 0.17
SFXN3-201ENST00000224807 IFNL3Q8IZI9 196 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 LRRC1Q9BTT6 524 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 PAK1Q13153 545 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 CTAGE1Q96RT6 745 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 JAG2Q9Y219 1238 aa16.1■□□□□ 0.17
SFXN3-201ENST00000224807 ZSCAN5CA6NGD5 496 aaPredicted RBP16.09■□□□□ 0.17
SFXN3-201ENST00000224807 BUB1O43683 1085 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 KIAA0754O94854 1291 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 ADD2P35612 726 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 USP5P45974 858 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 KIRREL3Q8IZU9 778 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 HPS3Q969F9 1004 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
SFXN3-201ENST00000224807 EPB41L4AQ9HCS5 686 aaPredicted RBP16.09■□□□□ 0.17
SFXN3-201ENST00000224807 GPR108Q9NPR9 543 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 SRPRBQ9Y5M8 271 aaKnown RBP16.09■□□□□ 0.17
SFXN3-201ENST00000224807 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 FMNL1O95466 1100 aaPredicted RBP16.09■□□□□ 0.17
SFXN3-201ENST00000224807 ARID5AQ03989 594 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 TYW1BQ6NUM6 668 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 NOC3LQ8WTT2 800 aaKnown RBP16.09■□□□□ 0.17
SFXN3-201ENST00000224807 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 SCN11AQ9UI33 1791 aa16.09■□□□□ 0.17
SFXN3-201ENST00000224807 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.17
SFXN3-201ENST00000224807 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.17
SFXN3-201ENST00000224807 ACTN3Q08043 901 aaPredicted RBP16.08■□□□□ 0.17
SFXN3-201ENST00000224807 EFCAB13Q8IY85 973 aa16.08■□□□□ 0.17
SFXN3-201ENST00000224807 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.17
SFXN3-201ENST00000224807 FAM207AQ9NSI2 230 aaPredicted RBP16.08■□□□□ 0.17
SFXN3-201ENST00000224807 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.17
SFXN3-201ENST00000224807 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.17
SFXN3-201ENST00000224807 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.17
SFXN3-201ENST00000224807 MOCS3O95396 460 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 ERCC5P28715 1186 aaPredicted RBP16.08■□□□□ 0.16
SFXN3-201ENST00000224807 SEC24CP53992 1094 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 PMS1P54277 932 aaKnown RBP16.08■□□□□ 0.16
SFXN3-201ENST00000224807 GUCY1A3Q02108 690 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 MMS22LQ6ZRQ5 1243 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 TMC4Q7Z404 712 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
SFXN3-201ENST00000224807 CD248Q9HCU0 757 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 SLIT3O75094 1523 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 PRCPP42785 496 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 CCDC70Q6NSX1 233 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 KANK3Q6NY19 840 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 TICAM2Q86XR7 235 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 OTUD6BQ8N6M0 293 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 FANCBQ8NB91 859 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 OR8K1Q8NGG5 319 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 WASF1Q92558 559 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 STRN4Q9NRL3 753 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 ZNHIT6Q9NWK9 470 aaKnown RBP16.08■□□□□ 0.16
SFXN3-201ENST00000224807 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.16
SFXN3-201ENST00000224807 CPDO75976 1380 aa16.08■□□□□ 0.16
SFXN3-201ENST00000224807 A0A087WUV0 522 aaPredicted RBP16.07■□□□□ 0.16
SFXN3-201ENST00000224807 PARP1P09874 1014 aaKnown RBP16.07■□□□□ 0.16
SFXN3-201ENST00000224807 HNRNPH1P31943 449 aaKnown RBP16.07■□□□□ 0.16
SFXN3-201ENST00000224807 MTIF2P46199 727 aaKnown RBP16.07■□□□□ 0.16
SFXN3-201ENST00000224807 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 MS4A14Q96JA4 679 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 MYO1BO43795 1136 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 MAP2K2P36507 400 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 NLRP5P59047 1200 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 HERVK_113P62684 666 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 CRACR2BQ8N4Y2 399 aaPredicted RBP16.07■□□□□ 0.16
SFXN3-201ENST00000224807 TMEM87BQ96K49 555 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 PPANQ9NQ55 473 aaKnown RBP16.07■□□□□ 0.16
SFXN3-201ENST00000224807 KIF13AQ9H1H9 1805 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
SFXN3-201ENST00000224807 ADAMTS3O15072 1205 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 NKRFO15226 690 aaKnown RBP eCLIP16.06■□□□□ 0.16
SFXN3-201ENST00000224807 NMT2O60551 498 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 DEXIO95424 95 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 KRT86O43790 486 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 IFNAR1P17181 557 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 EVX2Q03828 476 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms