RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
CDKL1-201ENST00000216378 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
CDKL1-201ENST00000216378 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 NACAP1Q9BZK3 213 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 LAMB1P07942 1786 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 TRIM75PA6NK02 468 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 PEX10O60683 326 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 ZYXQ15942 572 aaKnown RBP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 DCAF15Q66K64 600 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 MB21D2Q8IYB1 491 aaPredicted RBP13.11□□□□□ -0.31
CDKL1-201ENST00000216378 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 SLC10A4Q96EP9 437 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 PTPN18Q99952 460 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
CDKL1-201ENST00000216378 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
CDKL1-201ENST00000216378 RALYLQ86SE5 291 aaKnown RBP13.1□□□□□ -0.31
CDKL1-201ENST00000216378 WNK4Q96J92 1243 aa13.1□□□□□ -0.31
CDKL1-201ENST00000216378 FTOQ9C0B1 505 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDKL1-201ENST00000216378 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
CDKL1-201ENST00000216378 ROBO3Q96MS0 1386 aa13.1□□□□□ -0.31
CDKL1-201ENST00000216378 PTPDC1A2A3K4 754 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 SPP2Q13103 211 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 KLHL40Q2TBA0 621 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 SPRYD7Q5W111 196 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 PHIPQ8WWQ0 1821 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
CDKL1-201ENST00000216378 SYCE3A1L190 88 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 CTNND1O60716 968 aaKnown RBP13.09□□□□□ -0.31
CDKL1-201ENST00000216378 SLC10A3P09131 477 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 MOGSQ13724 837 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 ZSCAN23Q3MJ62 389 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
CDKL1-201ENST00000216378 NCOA7Q8NI08 942 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 R3HDMLQ9H3Y0 253 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 CSADQ9Y600 493 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
CDKL1-201ENST00000216378 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 GOLGA8BA8MQT2 603 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
CDKL1-201ENST00000216378 FKBP1BP68106 108 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 TFAP4Q01664 338 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
CDKL1-201ENST00000216378 HS1BP3Q53T59 392 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 EGFL6Q8IUX8 553 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 CMTR1Q8N1G2 835 aaKnown RBP13.08□□□□□ -0.32
CDKL1-201ENST00000216378 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 PFKFB2O60825 505 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 CAPN2P17655 700 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 MCM5P33992 734 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 MTMR2Q13614 643 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 CCDC82Q8N4S0 544 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 BRI3BPQ8WY22 251 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 ALDH8A1Q9H2A2 487 aaPredicted RBP13.08□□□□□ -0.32
CDKL1-201ENST00000216378 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
CDKL1-201ENST00000216378 DOCK1Q14185 1865 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDKL1-201ENST00000216378 HMGB1P09429 215 aaKnown RBP13.07□□□□□ -0.32
CDKL1-201ENST00000216378 FGRP09769 529 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
CDKL1-201ENST00000216378 CSPP1Q1MSJ5 1256 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 SKOR2Q2VWA4 1001 aaPredicted RBP13.07□□□□□ -0.32
CDKL1-201ENST00000216378 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
CDKL1-201ENST00000216378 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 CEP120Q8N960 986 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 TSPYL1Q9H0U9 437 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 ZSWIM5Q9P217 1185 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 HMGCS2P54868 508 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 ATP2B2Q01814 1243 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 STAG1Q8WVM7 1258 aa13.07□□□□□ -0.32
CDKL1-201ENST00000216378 ZMYM6O95789 1325 aa13.06□□□□□ -0.32
CDKL1-201ENST00000216378 MYH8P13535 1937 aa13.06□□□□□ -0.32
CDKL1-201ENST00000216378 H3BQV1 296 aa13.06□□□□□ -0.32
CDKL1-201ENST00000216378 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
CDKL1-201ENST00000216378 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
CDKL1-201ENST00000216378 FDPSP14324 419 aaKnown RBP13.06□□□□□ -0.32
CDKL1-201ENST00000216378 TRDNQ13061 729 aa13.06□□□□□ -0.32
CDKL1-201ENST00000216378 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
CDKL1-201ENST00000216378 POTEEQ6S8J3 1075 aa13.06□□□□□ -0.32
CDKL1-201ENST00000216378 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
CDKL1-201ENST00000216378 ZNF710Q8N1W2 664 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms