RNA–Protein interactions for RNA: ENST00000216122.8

MCM5-201, Transcript of minichromosome maintenance complex component 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM5, Length 3,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM5-201ENST00000216122 DDB1Q16531 1140 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 NUP88Q99567 741 aaPredicted RBP11.78□□□□□ -0.52
MCM5-201ENST00000216122 PAGR1Q9BTK6 254 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 MYO1AQ9UBC5 1043 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
MCM5-201ENST00000216122 ATP6V1G2O95670 118 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 NR1D1P20393 614 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 SCTRP47872 440 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
MCM5-201ENST00000216122 QPCTQ16769 361 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 ZCWPW1Q9H0M4 648 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 JADE2Q9NQC1 790 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 ABHD10Q9NUJ1 306 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 SMARCAL1Q9NZC9 954 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 FAM107AO95990 144 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 CNGA4Q8IV77 575 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 MAGEC3Q8TD91 643 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 SPAG5Q96R06 1193 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 ACTR5Q9H9F9 607 aaPredicted RBP11.78□□□□□ -0.52
MCM5-201ENST00000216122 DCCP43146 1447 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 ITSN1Q15811 1721 aa11.78□□□□□ -0.52
MCM5-201ENST00000216122 ZNF609O15014 1411 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 TTC36A6NLP5 189 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 EPB41P11171 864 aaKnown RBP11.77□□□□□ -0.52
MCM5-201ENST00000216122 POSTNQ15063 836 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 BEND3Q5T5X7 828 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 KDM7AQ6ZMT4 941 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 TMTC1Q8IUR5 882 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 HOOK2Q96ED9 719 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 LAMA4Q16363 1823 aa11.77□□□□□ -0.52
MCM5-201ENST00000216122 PSMD14O00487 310 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 ATP5JP18859 108 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 CKAP4Q07065 602 aaKnown RBP11.77□□□□□ -0.53
MCM5-201ENST00000216122 RESP18Q5W5W9 173 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.53
MCM5-201ENST00000216122 BRAPQ7Z569 592 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 CCDC43Q96MW1 224 aaKnown RBP11.77□□□□□ -0.53
MCM5-201ENST00000216122 PSMB7Q99436 277 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 ADD3Q9UEY8 706 aaKnown RBP11.77□□□□□ -0.53
MCM5-201ENST00000216122 WDR17Q8IZU2 1322 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
MCM5-201ENST00000216122 MSL1Q68DK7 614 aa11.77□□□□□ -0.53
MCM5-201ENST00000216122 SMYD4Q8IYR2 804 aaPredicted RBP11.77□□□□□ -0.53
MCM5-201ENST00000216122 ZNF233A6NK53 670 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 SMNDC1O75940 238 aaKnown RBP eCLIP11.76□□□□□ -0.53
MCM5-201ENST00000216122 ANP32DO95626 131 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 PBX1P40424 430 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 EXOSC10Q01780 885 aaKnown RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 CYP26C1Q6V0L0 522 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 TCP11Q8WWU5 503 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 FAM210AQ96ND0 272 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 ZNF570Q96NI8 536 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 EHD2Q9NZN4 543 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 CASP1P29466 404 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 ELF3P78545 371 aaPredicted RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 GRIN1Q05586 938 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 PIK3R5Q8WYR1 880 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 CUL5Q93034 780 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 SERTAD1Q9UHV2 236 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 POLR2DO15514 142 aaKnown RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 MGRN1O60291 552 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 NDUFA10O95299 355 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 KRT9P35527 623 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■■□ 20.2
MCM5-201ENST00000216122 DRP2Q13474 957 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 GNPTABQ3T906 1256 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 NFXL1Q6ZNB6 911 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 TRIM74Q86UV6 250 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 TRIM73Q86UV7 250 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 C15orf41Q9Y2V0 281 aa11.76□□□□□ -0.53
MCM5-201ENST00000216122 EPN1Q9Y6I3 576 aaPredicted RBP11.76□□□□□ -0.53
MCM5-201ENST00000216122 CLTAP09496 248 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
MCM5-201ENST00000216122 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
MCM5-201ENST00000216122 VPS16Q9H269 839 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 BATF3Q9NR55 127 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 DUSP10Q9Y6W6 482 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 A6NNZ2 444 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 E7EWF7 191 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 IDEP14735 1019 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 PTPAQ15257 358 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 SLC5A9Q2M3M2 681 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 TTC39AQ5SRH9 613 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 ALS2CLQ60I27 953 aa11.75□□□□□ -0.53
MCM5-201ENST00000216122 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
MCM5-201ENST00000216122 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms