RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■□□□□ 8.7
PTBP3-201ENST00000210227 BOLA2Q9H3K6 86 aa23.47■■□□□ 1.35
PTBP3-201ENST00000210227 RAB11FIP3O75154 756 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 MS4A1P11836 297 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 FCER1AP12319 257 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 VCANP13611 3396 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 TMEM132BQ14DG7 1078 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 TRIM60Q495X7 471 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 FAM47AQ5JRC9 791 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 C16orf86Q6ZW13 317 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 AMOTL1Q8IY63 956 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 PRDM5Q9NQX1 630 aaPredicted RBP23.46■■□□□ 1.35
PTBP3-201ENST00000210227 DDX19BQ9UMR2 479 aa23.46■■□□□ 1.35
PTBP3-201ENST00000210227 USP17L12C9JPN9 530 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 USP17L21D6R901 530 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 SLC25A27O95847 323 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 CHGBP05060 677 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 ATP5JP18859 108 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 LRRC41Q15345 812 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 HAUS7Q99871 368 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 PDLIM7Q9NR12 457 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 ZBTB40Q9NUA8 1239 aa23.45■■□□□ 1.34
PTBP3-201ENST00000210227 MYH4Q9Y623 1939 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 EEF2P13639 858 aaKnown RBP23.44■■□□□ 1.34
PTBP3-201ENST00000210227 ADCYAP1R1P41586 468 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 DDRGK1Q96HY6 314 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 FAM161BQ96MY7 647 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 FBXO28Q9NVF7 368 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 ADAMTS5Q9UNA0 930 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 COG6Q9Y2V7 657 aa23.44■■□□□ 1.34
PTBP3-201ENST00000210227 ROBO3Q96MS0 1386 aa23.43■■□□□ 1.34
PTBP3-201ENST00000210227 MIER1Q8N108 512 aa23.43■■□□□ 1.34
PTBP3-201ENST00000210227 FERMT2Q96AC1 680 aa23.43■■□□□ 1.34
PTBP3-201ENST00000210227 MMP19Q99542 508 aa23.43■■□□□ 1.34
PTBP3-201ENST00000210227 PGK2P07205 417 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 UBE3CQ15386 1083 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 SHHQ15465 462 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 C9orf50Q5SZB4 431 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 ZNF697Q5TEC3 545 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 RIOX2Q8IUF8 465 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 KANSL2Q9H9L4 492 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 GOPCQ9HD26 462 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 XPNPEP3Q9NQH7 507 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 NRBP1Q9UHY1 535 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 SLC4A4Q9Y6R1 1079 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 PRUNE2Q8WUY3 3088 aa23.42■■□□□ 1.34
PTBP3-201ENST00000210227 C1orf53Q5VUE5 145 aa23.41■■□□□ 1.34
PTBP3-201ENST00000210227 BADQ92934 168 aa23.41■■□□□ 1.34
PTBP3-201ENST00000210227 PPP1R9AQ9ULJ8 1098 aa23.41■■□□□ 1.34
PTBP3-201ENST00000210227 PHF24Q9UPV7 400 aa23.41■■□□□ 1.34
PTBP3-201ENST00000210227 VWA5AO00534 786 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 RARBP10826 455 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 KCTD2Q14681 263 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 FAM83BQ5T0W9 1011 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 CTR9Q6PD62 1173 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 SH3RF1Q7Z6J0 888 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.4■■□□□ 1.34
PTBP3-201ENST00000210227 TINF2Q9BSI4 451 aa23.4■■□□□ 1.34
PTBP3-201ENST00000210227 ZNF214Q9UL59 606 aaPredicted RBP23.4■■□□□ 1.34
PTBP3-201ENST00000210227 TRIM43BA6NCK2 446 aa23.39■■□□□ 1.33
PTBP3-201ENST00000210227 RAD21O60216 631 aa23.39■■□□□ 1.33
PTBP3-201ENST00000210227 STAT3P40763 770 aa23.39■■□□□ 1.33
PTBP3-201ENST00000210227 ZNF792Q3KQV3 632 aa23.39■■□□□ 1.33
PTBP3-201ENST00000210227 REPS2Q8NFH8 660 aa23.39■■□□□ 1.33
PTBP3-201ENST00000210227 TRIM43Q96BQ3 446 aaPredicted RBP23.39■■□□□ 1.33
PTBP3-201ENST00000210227 PUS7LQ9H0K6 701 aaKnown RBP23.39■■□□□ 1.33
PTBP3-201ENST00000210227 ARPP21Q9UBL0 812 aaPredicted RBP23.39■■□□□ 1.33
PTBP3-201ENST00000210227 MCM3APO60318 1980 aa23.39■■□□□ 1.33
PTBP3-201ENST00000210227 PGK1P00558 417 aa23.38■■□□□ 1.33
PTBP3-201ENST00000210227 TAL1P17542 331 aaPredicted RBP23.38■■□□□ 1.33
PTBP3-201ENST00000210227 COPB2P35606 906 aa23.38■■□□□ 1.33
PTBP3-201ENST00000210227 TLE2Q04725 743 aa23.38■■□□□ 1.33
PTBP3-201ENST00000210227 ZSCAN25Q6NSZ9 544 aa23.38■■□□□ 1.33
PTBP3-201ENST00000210227 DIS3Q9Y2L1 958 aaKnown RBP23.38■■□□□ 1.33
PTBP3-201ENST00000210227 RNF180Q86T96 592 aa23.37■■□□□ 1.33
PTBP3-201ENST00000210227 LENG1Q96BZ8 264 aaPredicted RBP23.37■■□□□ 1.33
PTBP3-201ENST00000210227 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.37■■□□□ 1.33
PTBP3-201ENST00000210227 NUP88Q99567 741 aaPredicted RBP23.36■■□□□ 1.33
PTBP3-201ENST00000210227 COL25A1Q9BXS0 654 aaPredicted RBP23.36■■□□□ 1.33
PTBP3-201ENST00000210227 SPTBN5Q9NRC6 3674 aaKnown RBP23.36■■□□□ 1.33
PTBP3-201ENST00000210227 A0A1W2PQ45 241 aaPredicted RBP23.35■■□□□ 1.33
PTBP3-201ENST00000210227 A0A1W2PQY0 241 aa23.35■■□□□ 1.33
PTBP3-201ENST00000210227 CLTBP09497 229 aa23.35■■□□□ 1.33
PTBP3-201ENST00000210227 ZNF865P0CJ78 1059 aaPredicted RBP23.35■■□□□ 1.33
PTBP3-201ENST00000210227 AKR1A1P14550 325 aa23.35■■□□□ 1.33
PTBP3-201ENST00000210227 CDX2Q99626 313 aaPredicted RBP23.35■■□□□ 1.33
PTBP3-201ENST00000210227 SLF1Q9BQI6 1058 aa23.35■■□□□ 1.33
PTBP3-201ENST00000210227 LRRCC1Q9C099 1032 aa23.35■■□□□ 1.33
PTBP3-201ENST00000210227 CHMP4BQ9H444 224 aaKnown RBP23.35■■□□□ 1.33
PTBP3-201ENST00000210227 CNPY2Q9Y2B0 182 aa23.35■■□□□ 1.33
PTBP3-201ENST00000210227 RASA1P20936 1047 aa23.34■■□□□ 1.33
PTBP3-201ENST00000210227 ITGB8P26012 769 aa23.34■■□□□ 1.33
PTBP3-201ENST00000210227 SMAD3P84022 425 aaKnown RBP23.34■■□□□ 1.33
PTBP3-201ENST00000210227 TEX13BQ9BXU2 312 aa23.34■■□□□ 1.33
PTBP3-201ENST00000210227 TACC3Q9Y6A5 838 aa23.34■■□□□ 1.33
PTBP3-201ENST00000210227 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
PTBP3-201ENST00000210227 PQBP1O60828 265 aaKnown RBP23.33■■□□□ 1.33
PTBP3-201ENST00000210227 ADAMTS4O75173 837 aa23.33■■□□□ 1.33
PTBP3-201ENST00000210227 SBK1Q52WX2 424 aa23.33■■□□□ 1.33
PTBP3-201ENST00000210227 SNRNP48Q6IEG0 339 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms