RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 TSPY3P0CV98 308 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 TSPY8P0CW00 308 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 NOVP48745 357 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 GRIN1Q05586 938 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 SHROOM1Q2M3G4 852 aaPredicted RBP12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 TNFRSF25Q93038 417 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 TMEM47Q9BQJ4 181 aa12.91□□□□□ -0.34
GPATCH1-201ENST00000170564 TYW1BQ6NUM6 668 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 CPVLQ9H3G5 476 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 DNAJC18Q9H819 358 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 BIN1O00499 593 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 PLCG2P16885 1265 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 CRKP46108 304 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 PPP2R5BQ15173 497 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 CEP95Q96GE4 821 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 FSIP1Q8NA03 581 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 ERO1AQ96HE7 468 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 EYA3Q99504 573 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
GPATCH1-201ENST00000170564 TMC6Q7Z403 805 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CERS3Q8IU89 383 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CNKSR1Q969H4 720 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CALCOCO1Q9P1Z2 691 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 PCDHB6Q9Y5E3 794 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CALM1P0DP23 149 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CALM2P0DP24 149 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CALM3P0DP25 149 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 STK38Q15208 465 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 SYCP1Q15431 976 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 ARHGAP29Q52LW3 1261 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 A0A1W2PQ27 194 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 A0A1W2PQ64 194 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 A0A1W2PQD8 194 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 DPEP1P16444 411 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 CCAR2Q8N163 923 aaKnown RBP12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 MNS1Q8NEH6 495 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 FAM198AQ9UFP1 575 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 STX8Q9UNK0 236 aa12.89□□□□□ -0.35
GPATCH1-201ENST00000170564 SHMT1P34896 483 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 BAG6P46379 1132 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 TRIM29Q14134 588 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 STX1AQ16623 288 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 WASF1Q92558 559 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 NRDCO43847 1150 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 AKR1B1P15121 316 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 GRM4Q14833 912 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 ZNF444Q8N0Y2 327 aaPredicted RBP12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
GPATCH1-201ENST00000170564 IGKV6D-41A0A0C4DH26 115 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 MRPS27Q92552 414 aaKnown RBP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 TRIM34Q9BYJ4 488 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 PLIN4Q96Q06 1357 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 FAM196BA6NMK8 535 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 CEP57L1Q8IYX8 460 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 LRRN4CLQ8ND94 238 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 HPSEQ9Y251 543 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 PFKFB1P16118 471 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 NEK11Q8NG66 645 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 UBXN4Q92575 508 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 MYH4Q9Y623 1939 aa12.87□□□□□ -0.35
GPATCH1-201ENST00000170564 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 SCG2P13521 617 aa12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 SPECC1Q5M775 1068 aa12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 G3V3G9 751 aa12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 NEMFO60524 1076 aa12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 PPP6R2O75170 966 aa12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
GPATCH1-201ENST00000170564 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms