RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 PLSCR1O15162 318 aa29.72■■■□□ 2.35
RTN4R-201ENST00000043402 NPR1P16066 1061 aa29.72■■■□□ 2.35
RTN4R-201ENST00000043402 SH3RF1Q7Z6J0 888 aa29.72■■■□□ 2.35
RTN4R-201ENST00000043402 DPF2Q92785 391 aa29.72■■■□□ 2.35
RTN4R-201ENST00000043402 PRIMPOLQ96LW4 560 aa29.72■■■□□ 2.35
RTN4R-201ENST00000043402 CPVLQ9H3G5 476 aa29.72■■■□□ 2.35
RTN4R-201ENST00000043402 F8W031 263 aaPredicted RBP29.71■■■□□ 2.35
RTN4R-201ENST00000043402 SLFN14P0C7P3 912 aa29.71■■■□□ 2.35
RTN4R-201ENST00000043402 SKILP12757 684 aa29.71■■■□□ 2.35
RTN4R-201ENST00000043402 TMC6Q7Z403 805 aa29.71■■■□□ 2.35
RTN4R-201ENST00000043402 FMR1Q06787 632 aaKnown RBP eCLIP29.71■■■□□ 2.35
RTN4R-201ENST00000043402 CEP95Q96GE4 821 aa29.71■■■□□ 2.35
RTN4R-201ENST00000043402 MXD3Q9BW11 206 aa29.71■■■□□ 2.35
RTN4R-201ENST00000043402 ZC3H12CQ9C0D7 883 aaKnown RBP29.71■■■□□ 2.35
RTN4R-201ENST00000043402 KLRF2D3W0D1 207 aa29.7■■■□□ 2.35
RTN4R-201ENST00000043402 GSDMDP57764 484 aa29.7■■■□□ 2.35
RTN4R-201ENST00000043402 TRIML1Q8N9V2 468 aa29.7■■■□□ 2.35
RTN4R-201ENST00000043402 MLKLQ8NB16 471 aa29.7■■■□□ 2.35
RTN4R-201ENST00000043402 PAGE5Q96GU1 130 aa29.7■■■□□ 2.35
RTN4R-201ENST00000043402 STXBP3O00186 592 aa29.7■■■□□ 2.34
RTN4R-201ENST00000043402 APBA3O96018 575 aa29.7■■■□□ 2.34
RTN4R-201ENST00000043402 AFMP43652 599 aa29.7■■■□□ 2.34
RTN4R-201ENST00000043402 C4orf32Q8N8J7 132 aa29.7■■■□□ 2.34
RTN4R-201ENST00000043402 MYRIPQ8NFW9 859 aa29.7■■■□□ 2.34
RTN4R-201ENST00000043402 HMGB2P26583 209 aaKnown RBP29.69■■■□□ 2.34
RTN4R-201ENST00000043402 CASP1P29466 404 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 PICALMQ13492 652 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 DOK7Q18PE1 504 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 HEATR3Q7Z4Q2 680 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 MED15Q96RN5 788 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 BARHL2Q9NY43 387 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 COL11A2P13942 1736 aaPredicted RBP29.69■■■□□ 2.34
RTN4R-201ENST00000043402 MMP10P09238 476 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 NOVP48745 357 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 ARMCX5Q6P1M9 558 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 PCDHA6Q9UN73 950 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 SUGT1Q9Y2Z0 365 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 PCDHA8Q9Y5H6 950 aa29.69■■■□□ 2.34
RTN4R-201ENST00000043402 UBASH3AP57075 661 aa29.68■■■□□ 2.34
RTN4R-201ENST00000043402 USP17L2Q6R6M4 530 aa29.68■■■□□ 2.34
RTN4R-201ENST00000043402 DDX4Q9NQI0 724 aaKnown RBP29.68■■■□□ 2.34
RTN4R-201ENST00000043402 DPP8Q6V1X1 898 aaPredicted RBP29.67■■■□□ 2.34
RTN4R-201ENST00000043402 C16orf45Q96MC5 204 aaPredicted RBP29.67■■■□□ 2.34
RTN4R-201ENST00000043402 LZTS2Q9BRK4 669 aa29.67■■■□□ 2.34
RTN4R-201ENST00000043402 SPZ1Q9BXG8 430 aa29.67■■■□□ 2.34
RTN4R-201ENST00000043402 SERPINC1P01008 464 aa29.67■■■□□ 2.34
RTN4R-201ENST00000043402 ALDH1B1P30837 517 aa29.67■■■□□ 2.34
RTN4R-201ENST00000043402 DAGLBQ8NCG7 672 aa29.67■■■□□ 2.34
RTN4R-201ENST00000043402 TTF2Q9UNY4 1162 aaKnown RBP29.67■■■□□ 2.34
RTN4R-201ENST00000043402 TOP1P11387 765 aaKnown RBP29.66■■■□□ 2.34
RTN4R-201ENST00000043402 GABPAQ06546 454 aa29.66■■■□□ 2.34
RTN4R-201ENST00000043402 E2F4Q16254 413 aa29.66■■■□□ 2.34
RTN4R-201ENST00000043402 QSER1Q2KHR3 1735 aa29.66■■■□□ 2.34
RTN4R-201ENST00000043402 USP27XA6NNY8 438 aa29.66■■■□□ 2.34
RTN4R-201ENST00000043402 PARP1P09874 1014 aaKnown RBP29.66■■■□□ 2.34
RTN4R-201ENST00000043402 DPYDQ12882 1025 aa29.66■■■□□ 2.34
RTN4R-201ENST00000043402 CCDC148Q8NFR7 591 aa29.66■■■□□ 2.34
RTN4R-201ENST00000043402 MYO1BO43795 1136 aa29.65■■■□□ 2.34
RTN4R-201ENST00000043402 PDE6BP35913 854 aa29.65■■■□□ 2.34
RTN4R-201ENST00000043402 HSP90AA4PQ58FG1 418 aa29.65■■■□□ 2.34
RTN4R-201ENST00000043402 TRMT44Q8IYL2 757 aaKnown RBP29.65■■■□□ 2.34
RTN4R-201ENST00000043402 ENOX1Q8TC92 643 aaKnown RBP29.65■■■□□ 2.34
RTN4R-201ENST00000043402 DACH1Q9UI36 760 aa29.65■■■□□ 2.34
RTN4R-201ENST00000043402 NFE2L3Q9Y4A8 694 aa29.64■■■□□ 2.34
RTN4R-201ENST00000043402 ZNF18P17022 549 aa29.64■■■□□ 2.34
RTN4R-201ENST00000043402 CFAP100Q494V2 611 aa29.64■■■□□ 2.34
RTN4R-201ENST00000043402 ARL6IP4Q66PJ3 421 aaKnown RBP29.64■■■□□ 2.34
RTN4R-201ENST00000043402 CCDC34Q96HJ3 373 aa29.64■■■□□ 2.34
RTN4R-201ENST00000043402 ADAMTSL1Q8N6G6 1762 aa29.64■■■□□ 2.33
RTN4R-201ENST00000043402 CCDC194A0A1B0GVG4 234 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 SCNN1DP51172 638 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 MSL1Q68DK7 614 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 GALNT17Q6IS24 598 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 STAMQ92783 540 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 MASTLQ96GX5 879 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 INTS13Q9NVM9 706 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 PARP3Q9Y6F1 533 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 TMEM232C9JQI7 657 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 DYNC1I1O14576 645 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 CBFA2T2O43439 604 aa29.63■■■□□ 2.33
RTN4R-201ENST00000043402 TPD52L1Q16890 204 aaPredicted RBP29.63■■■□□ 2.33
RTN4R-201ENST00000043402 INF2Q27J81 1249 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 CCDC150Q8NCX0 1101 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 ZMYND12Q9H0C1 365 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 GOLGB1Q14789 3259 aaKnown RBP29.62■■■□□ 2.33
RTN4R-201ENST00000043402 USP17L5A8MUK1 530 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 PTPN21Q16825 1174 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 PDXDC2PQ6P474 469 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 HOMER1Q86YM7 354 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 MTRQ99707 1265 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 USP40Q9NVE5 1235 aa29.62■■■□□ 2.33
RTN4R-201ENST00000043402 PLIN4Q96Q06 1357 aa29.61■■■□□ 2.33
RTN4R-201ENST00000043402 CD44P16070 742 aaKnown RBP29.61■■■□□ 2.33
RTN4R-201ENST00000043402 CDC25AP30304 524 aa29.61■■■□□ 2.33
RTN4R-201ENST00000043402 IQUBQ8NA54 791 aa29.61■■■□□ 2.33
RTN4R-201ENST00000043402 TMEM60Q9H2L4 133 aa29.61■■■□□ 2.33
RTN4R-201ENST00000043402 MTMR4Q9NYA4 1195 aa29.61■■■□□ 2.33
RTN4R-201ENST00000043402 TNNT1P13805 278 aa29.6■■■□□ 2.33
RTN4R-201ENST00000043402 AKR1B1P15121 316 aa29.6■■■□□ 2.33
RTN4R-201ENST00000043402 SFPQP23246 707 aaKnown RBP eCLIP29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms