RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
TTC17-201ENST00000039989 LRSAM1Q6UWE0 723 aa12.32□□□□□ -0.44
TTC17-201ENST00000039989 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
TTC17-201ENST00000039989 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
TTC17-201ENST00000039989 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
TTC17-201ENST00000039989 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
TTC17-201ENST00000039989 F5H6K3 240 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 ADCY5O95622 1261 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 KLRC3Q07444 240 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 IGDCC4Q8TDY8 1250 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 PHRF1Q9P1Y6 1649 aaKnown RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 DDAH1O94760 285 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 ZNF512BQ96KM6 892 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 NCAPG2Q86XI2 1143 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 FOXP4Q8IVH2 680 aaPredicted RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 RASA1P20936 1047 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 PNOCQ13519 176 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
TTC17-201ENST00000039989 CHURC1Q8WUH1 139 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
TTC17-201ENST00000039989 GPR75-ASB3A0A0A6YYF3 556 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 CCT6AP40227 531 aaKnown RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 ALX1Q15699 326 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 STX1AQ16623 288 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 EHMT1Q9H9B1 1298 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 MYOZ2Q9NPC6 264 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 TMEM260Q9NX78 707 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 ZBED4O75132 1171 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 NDUFA8P51970 172 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 R3HCC1Q9Y3T6 440 aaKnown RBP12.3□□□□□ -0.44
TTC17-201ENST00000039989 CALCRLQ16602 461 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 TMTC3Q6ZXV5 915 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 SNX29Q8TEQ0 813 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
TTC17-201ENST00000039989 DEFB129Q9H1M3 183 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 LRWD1Q9UFC0 647 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 ALS2Q96Q42 1657 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 KCPQ6ZWJ8 1503 aa12.3□□□□□ -0.44
TTC17-201ENST00000039989 PFKFB1P16118 471 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 ZKSCAN4Q969J2 545 aaPredicted RBP12.29□□□□□ -0.44
TTC17-201ENST00000039989 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 RNF26Q9BY78 433 aaPredicted RBP12.29□□□□□ -0.44
TTC17-201ENST00000039989 DACH1Q9UI36 760 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 LTBP4Q8N2S1 1624 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 CDC37Q16543 378 aaPredicted RBP12.29□□□□□ -0.44
TTC17-201ENST00000039989 DGKHQ86XP1 1220 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 TBCKQ8TEA7 893 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 EXOC1Q9NV70 894 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 TRPM3Q9HCF6 1732 aaPredicted RBP12.29□□□□□ -0.44
TTC17-201ENST00000039989 NEMFO60524 1076 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 ATRNO75882 1429 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 CASP1P29466 404 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 ECE1P42892 770 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 HMGCS2P54868 508 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 VTI1AQ96AJ9 217 aa12.29□□□□□ -0.44
TTC17-201ENST00000039989 KIF28PB7ZC32 967 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 CTAGE5O15320 804 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 SHROOM1Q2M3G4 852 aaPredicted RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 SUPT20HL1Q3ZLR7 823 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 TMEM179Q6ZVK1 233 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 PPFIBP1Q86W92 1011 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 GAS2L3Q86XJ1 694 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 SYCP3Q8IZU3 236 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 MTIF2P46199 727 aaKnown RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 STAT2P52630 851 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 TMC6Q7Z403 805 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 IQUBQ8NA54 791 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 ACER1Q8TDN7 264 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 SEPT11Q9NVA2 429 aaKnown RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 FBXO28Q9NVF7 368 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 TRMT1Q9NXH9 659 aaKnown RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 MMP1P03956 469 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
TTC17-201ENST00000039989 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
TTC17-201ENST00000039989 TBCAO75347 108 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms