RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Camsap3Q80VC9 1252 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Pramel6Q810Y9 485 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Enox1Q8BHR2 643 aaKnown RBP10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kif2bQ8C0N1 668 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rassf4Q8CB96 322 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cd209bQ8CJ91 325 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Prpf3Q922U1 683 aaKnown RBP10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cetn2Q9R1K9 172 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Plcb1Q9Z1B3 1216 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Lbhd1A0A087WPA0 259 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 DnttP09838 530 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tubb5P99024 444 aaKnown RBP10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 DSCC1Q14AI0 399 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cyp7b1Q60991 507 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Panx2Q6IMP4 677 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Fam102bQ8BQS4 339 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ccz1Q8C1Y8 480 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Klhl20Q8VCK5 604 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tspyl4Q8VD63 406 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nlrp5Q9R1M5 1163 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Foxo4Q9WVH3 505 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Large1Q9Z1M7 756 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Samd15F6XZJ7 620 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ppp1r9aH3BJD6 1292 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kiaa1468Q148V7 1216 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Usp50Q6P8X6 390 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Hgh1Q8C3I8 393 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Galnt15Q9D2N8 638 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tktl2Q9D4D4 627 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Copb1Q9JIF7 953 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Exoc3l2D3YUP5 789 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Pagr1bF6V0H0 108 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rad23aP54726 363 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Trappc10Q3TLI0 1259 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Znf496Q5SXI5 585 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nxf1Q99JX7 618 aaKnown RBP10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Pagr1aQ99L02 253 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Lrp2bpQ9D4C6 346 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 ChmQ9QXG2 665 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Bcl9Q9D219 1425 aa10.5□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Eef2P58252 858 aaKnown RBP10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ankrd13cQ3UX43 541 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sdccag8Q80UF4 717 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Armcx3Q8BHS6 379 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nek9Q8K1R7 984 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 PdclQ9DBX2 301 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tmem131lQ3U3D7 1597 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kcnh4A2A5F7 1018 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cpb1B2RS76 415 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Casp12O08736 419 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nr1i2O54915 431 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cyp2d10P24456 504 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ranbp1P34022 203 aaKnown RBP10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cyp4x1Q6A152 507 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Jade3Q6IE82 823 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tmem179Q8BHH9 233 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kiaa1524Q8BWY9 907 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 PaoxQ8C0L6 504 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Slc18a1Q8R090 521 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Vps37cQ8R105 352 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 SnrkQ8VDU5 748 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rps6ka4Q9Z2B9 773 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Krt40Q6IFX3 439 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nwd1A6H603 1563 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Krt18P05784 423 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Als2cr12Q8BVM7 383 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 SfpqQ8VIJ6 699 aaKnown RBP10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sar1bQ9CQC9 198 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Mtmr2Q9Z2D1 643 aa10.49□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Klhl34A2AI76 644 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 MybP06876 636 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sox5P35710 763 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 GalcP54818 684 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tax1bp1Q3UKC1 814 aaKnown RBP10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tbc1d9bQ5SVR0 1263 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 AsnsQ61024 561 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Edrf1Q6GQV7 1239 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sval3Q76I99 144 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ccdc25Q78PG9 208 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kcnf1Q7TSH7 493 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tbc1d23Q8K0F1 684 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Usp33Q8R5K2 909 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm5580A0A0N4SVP8 411 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Krt78E9Q0F0 1068 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tdo2P48776 406 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 RubcnlQ3TD16 648 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 TfrcQ62351 763 aaKnown RBP10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nap1l4Q78ZA7 375 aaKnown RBP10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Usp37Q8C0R0 979 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ints4Q8CIM8 964 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 GlyctkQ8QZY2 523 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 HdlbpQ8VDJ3 1268 aaKnown RBP10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 MbipQ99LQ1 341 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 RabggtaQ9JHK4 567 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Vstm4T1NXB5 319 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 E9QMW4 1145 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Lrrc32G3XA59 663 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Dnm2P39054 870 aaKnown RBP10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 CebpaP53566 359 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Acot10Q32MW3 439 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms