RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Bag3Q9JLV1 577 aaKnown RBP9.51□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Usp14Q9JMA1 493 aaKnown RBP9.51□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ly6g6dQ9Z1Q3 135 aa9.51□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Htatip2Q9Z2G9 242 aa9.51□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ankrd11E9Q4F7 2643 aa9.51□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ankrd35E9Q9D8 996 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 TsksO54887 585 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 DnttP09838 530 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Lman2lP59481 347 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Stim2P83093 746 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ppp4cP97470 307 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Xkr5Q5GH66 676 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Mybpc2Q5XKE0 1136 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ppm1gQ61074 542 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ltv1Q6NSQ7 470 aaKnown RBP9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Defb15Q8R2I5 79 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 DaglbQ91WC9 669 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Dchs2A0A0A6YW72 3346 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Rad50P70388 1312 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Spg11Q3UHA3 2430 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Pnpla6Q3TRM4 1355 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Myo7aP97479 2215 aa9.5□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Gvin1Q80SU7 2427 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Flot1O08917 428 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Il7P10168 154 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Bmp8aP34821 399 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Q3UPC7 1272 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Cln3Q61124 438 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Kcna4Q61423 654 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Phf24Q80TL4 400 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Fbxo28Q8BIG4 368 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 AnlnQ8K298 1121 aaKnown RBP9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Foxe1Q8R2I0 371 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ttll1Q91V51 423 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Dusp6Q9DBB1 381 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Rai14Q9EP71 979 aaKnown RBP9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Prkab1Q9R078 270 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Atp1a4Q9WV27 1032 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Irs2P81122 1321 aa9.49□□□□□ -0.89
Scn8a-207ENSMUST00000200959 KalrnA2CG49 2964 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Otud7bB2RUR8 840 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Prl7d1P04769 244 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ca3P16015 260 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 DmwdQ08274 665 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 March9Q3TZ87 348 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Mindy1Q76LS9 468 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Pgrmc2Q80UU9 217 aaKnown RBP9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 GldcQ91W43 1025 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Sh2b2Q9JID9 621 aa9.48□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Znf638Q61464 1960 aaKnown RBP9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Sema3fO88632 785 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Hoxc10P31257 342 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Fam178bQ24JP3 464 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Tmem63bQ3TWI9 832 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Gm29609Q3UU56 907 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Cyp24a1Q64441 514 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Krt40Q6IFX3 439 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Adck5Q80V03 582 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Gtf3c2Q8BL74 907 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Serpinb13Q8CDC0 389 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Tdrd3Q91W18 743 aaKnown RBP9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Tdrd1Q99MV1 1172 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Tceal9Q9DD24 104 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Usp31E9Q6Y8 1344 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Kdm3aQ6PCM1 1323 aa9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Chd7A2AJK6 2986 aaKnown RBP9.47□□□□□ -0.89
Scn8a-207ENSMUST00000200959 Ect2lA0A140LIP2 953 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Fyb2A2A995 729 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Axin1O35625 863 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Wisp1O54775 367 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Mdm2P23804 489 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Sema3eP70275 775 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Bach1P97302 739 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Nhlh1Q02576 133 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Znf800Q0VEE6 662 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Cpa4Q6P8K8 420 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 BcrQ6PAJ1 1270 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Fam102bQ8BQS4 339 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ccdc30Q8BVF4 654 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Kdm8Q9CXT6 414 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Acox2Q9QXD1 681 aa9.46□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Dnajc25A2ALW5 357 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gm20503G3UZK1 150 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Prl3d1P18121 224 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Glud1P26443 558 aaKnown RBP9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 FpgsP48760 587 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Evx2P49749 475 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Defa-rs7P50715 91 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Psmc6P62334 389 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ralbp1Q62172 648 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Tcaf3Q6QR59 914 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Susd6Q8BGE4 302 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Rbm34Q8C5L7 375 aaKnown RBP9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 HibadhQ99L13 335 aaKnown RBP9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 MutyhQ99P21 515 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gadd45gip1Q9CR59 222 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 MthfsQ9D110 203 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 IcoslgQ9JHJ8 322 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Hic1Q9R1Y5 733 aa9.45□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Skint3A7TZF0 458 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms