RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Col24a1Q30D77 1733 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Cfap99A0A140LIX9 648 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Atp11aP98197 1187 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Srrm1Q52KI8 946 aaKnown RBP9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 MycbpapQ5SUV2 932 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 PogkQ80TC5 607 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Siglec10Q80ZE3 688 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Nol12Q8BG17 217 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Mbtps2Q8CHX6 515 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Frmpd4A2AFR3 1320 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Metap2O08663 478 aaKnown RBP9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Fbln1Q08879 705 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Eepd1Q3TGW2 569 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Fbxo2Q80UW2 297 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Pxylp1Q8BHA9 480 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Sirt2Q8VDQ8 389 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Elp3Q9CZX0 547 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Cnpy3Q9DAU1 276 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Znf287Q9EQB9 759 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Tfap4Q9JIZ5 338 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Nap1l5Q9JJF0 156 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Atp8b3Q6UQ17 1335 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Osbpl2Q8BX94 484 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 BaatQ91X34 420 aa9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 LlphQ9D945 130 aaKnown RBP9.68□□□□□ -0.86
Trim39-205ENSMUST00000173369 Rabep1O35551 862 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Igfbp4P47879 254 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ncaph2Q8BSP2 607 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Kcnv2Q8CFS6 562 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Trim32Q8CH72 655 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Fam83aQ8K2P2 436 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Cyp27a1Q9DBG1 533 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Col11a1Q61245 1804 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 AfdnQ9QZQ1 1820 aaKnown RBP9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Dhx8A2A4P0 1244 aaKnown RBP9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Gm10093D3YYI8 482 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Hdac1O09106 482 aaKnown RBP9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Anapc15P60007 132 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Scg2Q03517 617 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Clul1Q3ZRW6 464 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ccdc85aQ5SP85 500 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Specc1Q5SXY1 1067 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Atp13a3Q5XF89 1219 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 LrmpQ60664 539 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Bola3Q8CEI1 110 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Onecut3Q8K557 490 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Bst2Q8R2Q8 172 aa9.67□□□□□ -0.86
Trim39-205ENSMUST00000173369 Mx1P09922 631 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 NefhP19246 1090 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Utp18Q5SSI6 552 aaKnown RBP9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Htatsf1Q8BGC0 757 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Nop2Q922K7 793 aaKnown RBP9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ccdc88aQ5SNZ0 1873 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Jbts17Q8CE72 3214 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 TicrrQ8BQ33 1889 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Il13ra2O88786 383 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Tph1P17532 447 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Armc2Q3URY6 854 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Swap70Q6A028 585 aaKnown RBP9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Fbxo10Q7TQF2 950 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Mrps27Q8BK72 415 aaKnown RBP9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Mov10l1Q99MV5 1187 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Stk25Q9Z2W1 426 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 FAM186AQ9D9R9 1790 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Nkx1-1G3UXB3 402 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Hmgb1P63158 215 aaKnown RBP9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Lilrb3P97484 841 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Cfap52Q5F201 620 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Vmn1r209Q5NC97 312 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Podnl1Q6P3Y9 559 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Dcaf15Q6PFH3 600 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Gprasp2Q8BUY8 826 aa9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Zhx2Q8C0C0 836 aaKnown RBP9.66□□□□□ -0.86
Trim39-205ENSMUST00000173369 Kiaa0100Q5SYL3 2234 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Dnaaf5B9EJR8 853 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Parp2O88554 559 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Kcna1P16388 495 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Pou3f3P31361 497 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Trmt1Q3TX08 663 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Kansl1lQ5DTI6 991 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Myo19Q5SV80 963 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Gba2Q69ZF3 918 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Fndc3bQ6NWW9 1207 aaKnown RBP9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Clca4aQ6Q473 924 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Znf784Q8BI69 297 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Pspc1Q8R326 523 aaKnown RBP9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 PtmsQ9D0J8 101 aaKnown RBP9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Galntl5Q9D4M9 431 aa9.65□□□□□ -0.86
Trim39-205ENSMUST00000173369 Pitpnm2Q6ZPQ6 1335 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Naaladl2A0A0N4SUJ3 795 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Mtx1P47802 317 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Grm1P97772 1199 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Fam83hQ148V8 1209 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cpa2Q504N0 417 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Filip1lQ6P6L0 1131 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 PigsQ6PD26 555 aaKnown RBP9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ranbp6Q8BIV3 1105 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 AnlnQ8K298 1121 aaKnown RBP9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tdrd1Q99MV1 1172 aa9.65□□□□□ -0.87
Trim39-205ENSMUST00000173369 Mkrn1Q9QXP6 481 aa9.65□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms