RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 Lrrc4bP0C192 709 aa13.74□□□□□ -0.21
Lig1-210ENSMUST00000165964 Dnm2P39054 870 aaKnown RBP13.74□□□□□ -0.21
Lig1-210ENSMUST00000165964 Trappc10Q3TLI0 1259 aa13.74□□□□□ -0.21
Lig1-210ENSMUST00000165964 Recql4Q75NR7 1216 aaKnown RBP13.74□□□□□ -0.21
Lig1-210ENSMUST00000165964 Spice1Q8C804 860 aa13.74□□□□□ -0.21
Lig1-210ENSMUST00000165964 Mss51Q9D5Z5 446 aa13.74□□□□□ -0.21
Lig1-210ENSMUST00000165964 Psmd14O35593 310 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 ByslO54825 436 aaKnown RBP13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ctr9Q62018 1173 aaKnown RBP13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Pabpc4Q6PHQ9 660 aaKnown RBP13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Aggf1Q7TN31 711 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 RarsQ9D0I9 660 aaKnown RBP13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Fut8Q9WTS2 575 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Izumo3A6PWV3 263 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 1700029H14RikE9PY36 240 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Gm4307E9PZY4 289 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Gm4312K9J7E2 289 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Klra1P20937 262 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 GypcQ78HU7 95 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Cct8l1Q80YT3 562 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Smim5Q8BT42 78 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Tango6Q8C3S2 1079 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Tmem63cQ8CBX0 802 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Eps8l1Q8R5F8 716 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Srgap2Q91Z67 1071 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Dbndd2Q9CRD4 158 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Clstn1Q9EPL2 979 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Scgb2b11A0A087WR49 112 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Casp1P29452 402 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Smarcc1P97496 1104 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ehmt1Q5DW34 1296 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ttc26Q8BS45 554 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Vmn1r218Q8R261 298 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Pspc1Q8R326 523 aaKnown RBP13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Apopt1Q9CQW7 192 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ttc14Q9CSP9 761 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Dnajc7Q9QYI3 494 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 PappaQ8R4K8 1624 aa13.73□□□□□ -0.21
Lig1-210ENSMUST00000165964 Irak1Q62406 710 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Rbm15bQ6PHZ5 887 aaKnown RBP13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ildr1Q8CBR1 537 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ccdc38Q8CDN8 563 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Q91WD4 421 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Hsd3b7Q9EQC1 369 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Ubxn8Q9QZ49 277 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Pfkfb3A7UAK5 555 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Tmtc2Q56A06 836 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Sema4bQ62179 823 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Tmem60Q8K174 133 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Sar1bQ9CQC9 198 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Gpaa1Q9WTK3 621 aa13.72□□□□□ -0.21
Lig1-210ENSMUST00000165964 Cyp2c23E9Q5K4 494 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Tuft1O08970 390 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Stap2Q8R0L1 411 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 AfdnQ9QZQ1 1820 aaKnown RBP13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Enc1O35709 589 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Nr5a1P33242 462 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Meis3P97368 378 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 GscQ02591 256 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Papd7Q6PB75 542 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Zdhhc14Q8BQQ1 489 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Spata16Q8C636 571 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Gimap7Q8R379 293 aa13.71□□□□□ -0.21
Lig1-210ENSMUST00000165964 Cct6aP80317 531 aaKnown RBP13.71□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ifit1bl2Q3U687 466 aa13.71□□□□□ -0.22
Lig1-210ENSMUST00000165964 ParvgQ9ERD8 331 aa13.71□□□□□ -0.22
Lig1-210ENSMUST00000165964 Irs4Q9Z0Y7 1216 aa13.71□□□□□ -0.22
Lig1-210ENSMUST00000165964 Pet2A2AHY8 747 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Herc3A6H6S0 1050 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Dnajc21E9Q8D0 531 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ano9P86044 747 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Txndc16Q7TN22 820 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ankrd31A0A140LI88 1765 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Aox3G3X982 1335 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ankrd63A2ARS0 390 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Gm5934D3Z4U6 212 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ube4aE9Q735 1028 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Usp50Q6P8X6 390 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Cyp4f39Q8BGU0 532 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Tmem134Q8R0J4 195 aa13.7□□□□□ -0.22
Lig1-210ENSMUST00000165964 Akap11E9Q777 1895 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Scn4aQ9ER60 1841 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Gm10378F6XQQ1 160 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Stx8O88983 236 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ranbp1P34022 203 aaKnown RBP13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Slc9a1Q61165 820 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ddx3yQ62095 658 aaKnown RBP13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Vipas39Q8BGQ1 491 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Cfap69Q8BH53 942 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 CpvlQ9D3S9 478 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Brwd3A2AHJ4 1799 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 PfasQ5SUR0 1337 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Snx12O70493 165 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Rnf40Q3U319 1001 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Exoc8Q6PGF7 716 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ccp110Q7TSH4 1004 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Miga2Q8BK03 593 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Ccdc122Q8BVN0 290 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Kif2bQ8C0N1 668 aa13.69□□□□□ -0.22
Lig1-210ENSMUST00000165964 Mapkapk5O54992 473 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms