RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Ccdc88aQ5SNZ0 1873 aa16.1■□□□□ 0.17
Ercc1-203ENSMUST00000160369 Celf5D3Z4T1 395 aaKnown RBP16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 1700013D24RikQ0P521 120 aa16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 Vmn1r209Q5NC97 312 aa16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 Plcd3Q8K2J0 785 aa16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 DaglbQ91WC9 669 aa16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 BrapQ99MP8 591 aa16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.09■□□□□ 0.17
Ercc1-203ENSMUST00000160369 Mx1P09922 631 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Kifap3P70188 793 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Atp11aP98197 1187 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Gm10392Q3V3I3 114 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Sap130Q8BIH0 1057 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Socs7Q8VHQ2 579 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Tdrd3Q91W18 743 aaKnown RBP16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Mrpl11Q9CQF0 192 aaKnown RBP16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 PdhbQ9D051 359 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 4921524L21RikQ9D5T2 438 aa16.08■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Smarce1O54941 411 aaKnown RBP16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Cyp26a1O55127 497 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Hoxd11P23813 323 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Hspa8P63017 646 aaKnown RBP16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ttbk2Q3UVR3 1243 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Btg1-ps1Q3V0S2 161 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Btg1-ps2Q3V0X0 161 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Myo19Q5SV80 963 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Kif1bpQ6ZPU9 617 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Taok2Q6ZQ29 1240 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Galnt17Q7TT15 598 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Arhgef25Q9CWR0 618 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Leng1Q9DB98 261 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Rcan1Q9JHG6 198 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Tfap4Q9JIZ5 338 aa16.07■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Metap2O08663 478 aaKnown RBP16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Nck2O55033 380 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Stat3P42227 770 aaKnown RBP16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Il6stQ00560 917 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Specc1Q5SXY1 1067 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ces5aQ6AW46 575 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 1700010I14RikQ7TPG0 532 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Zhx2Q8C0C0 836 aaKnown RBP16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Bola3Q8CEI1 110 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Cd2apQ9JLQ0 637 aa16.06■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Krt28A6BLY7 462 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 1700006A11RikB9EHI3 544 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Gm10093D3YYI8 482 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Hdac1O09106 482 aaKnown RBP16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Stag2O35638 1231 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Hoxd10P28359 340 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 F2rP30558 430 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Igfbp4P47879 254 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Map4k1P70218 827 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Cplx2P84086 134 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Pkp1P97350 728 aaKnown RBP16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Pdlim7Q3TJD7 457 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ckap2Q3V1H1 664 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Mdh1bQ5F204 500 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Utp18Q5SSI6 552 aaKnown RBP16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ces3aQ63880 571 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Tmem59lQ7TNI2 337 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 H2-Q4Q8HWB2 354 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 KinQ8K339 391 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Tmc1Q8R4P5 757 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ces3bQ8VCU1 571 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Inpp4aQ9EPW0 939 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Azi2Q9QYP6 405 aa16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 IkQ9Z1M8 557 aaKnown RBP16.05■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Rabgap1A2AWA9 1064 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Trim5E9PV98 497 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 OgdhlE9Q7L0 1029 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Nfil3O08750 462 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Gjd2O54851 321 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 EvcP57680 1005 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Armc2Q3URY6 854 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Nsrp1Q5NCR9 542 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Churc1Q6DG52 112 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 BcrQ6PAJ1 1270 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Clca4aQ6Q473 924 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Peg10Q7TN75 958 aaKnown RBP16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Fsd1Q7TPM6 496 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ppp1r10Q80W00 888 aaKnown RBP16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Triml1Q8BVP1 470 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Tpcn2Q8BWC0 731 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 GlmnQ8BZM1 596 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 E4f1Q8CCE9 783 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 SltmQ8CH25 1031 aaKnown RBP16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Slc4a8Q8JZR6 1089 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Rufy2Q8R4C2 606 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ivns1abpQ920Q8 642 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ifi202Q9R002 445 aa16.04■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Fam71e1A1L3C1 212 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Vmn2r23E9PXI5 849 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Gm15448F6PZL4 682 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 CatspereP0DP43 985 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ddit3P35639 168 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Psmc4P54775 418 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Cep63Q3UPP8 700 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Grm4Q68EF4 912 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Tbc1d5Q80XQ2 815 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 BC048507Q80ZS7 89 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms