RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Dnajb7Q9QYI8 312 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Aldh18a1Q9Z110 795 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ttc41Q692V3 1318 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 AW822073A0A0N4SUK1 652 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 EzrP26040 586 aaKnown RBP9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 SgtaQ8BJU0 315 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 ApobrQ8VBT6 942 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 ZwintQ9CQU5 252 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pacsin2Q9WVE8 486 aaKnown RBP9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nfatc2ipO09130 412 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Eef2P58252 858 aaKnown RBP9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 MlxipQ2VPU4 917 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sdf4Q61112 361 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Arhgef18Q6P9R4 1021 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Zkscan8Q8BSL0 588 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Parp9Q8CAS9 866 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cgref1Q8R1U2 281 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Gm8267E9Q207 261 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Gm379J3QQ19 296 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nfil3O08750 462 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 MycP01108 439 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Foxn3Q499D0 457 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ddx3yQ62095 658 aaKnown RBP9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Serpinb13Q8CDC0 389 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Lrrc74aA0A1Y7VMD6 494 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 9330159F19RikD3Z623 648 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Xbp1O35426 267 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Slc12a1P55014 1095 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Kcnh1Q60603 989 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pcdhb16Q91Y03 802 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Efcab2Q9CQ46 164 aa9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Prkrip1Q9CWV6 186 aaKnown RBP9.88□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Repin1Q5U4E2 545 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc30Q8BVF4 654 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tbl3Q8C4J7 801 aaKnown RBP9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Atg14Q8CDJ3 492 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Kdelc1Q9JHP7 502 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 PolhQ9JJN0 694 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Catsper2A2ARP9 588 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cnbd1B1AWM0 430 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 NeblQ0II04 452 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Brsk1Q5RJI5 778 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Fam118bQ8C569 351 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mtrf1Q8K126 446 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Atp6v1g1Q9CR51 118 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rsph14Q9D3W1 341 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cmtr1Q9DBC3 837 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Scyl1Q9EQC5 806 aaKnown RBP9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Katna1Q9WV86 491 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sptlc1O35704 473 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sem1P60897 70 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Fan1Q69ZT1 1020 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Chtf18Q8BIW9 969 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc122Q8BVN0 290 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Stk32cQ8QZV4 488 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pnma5Q5DTT8 618 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Enox1Q8BHR2 643 aaKnown RBP9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc68Q8BVC4 333 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pex5lQ8C437 567 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rrs1Q9CYH6 365 aaKnown RBP9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sh3bgrQ9WUZ7 214 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cep85lA0A1W2P884 806 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 A0A286YCQ8 80 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 1700006A11RikB9EHI3 544 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Scamp3O35609 349 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tspan6O70401 245 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Alox15P39654 663 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Art5P70352 309 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Stim2P83093 746 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Krt76Q3UV17 594 aaKnown RBP9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Serpinb6dQ3UWK8 375 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cep112Q5PR68 954 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pacsin1Q61644 441 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mtmr12Q80TA6 747 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Creg2Q8BGC9 288 aa9.87□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tbc1d8bA3KGB4 1114 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Stox1B2RQL2 990 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Axin2O88566 840 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Zbtb17Q60821 794 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Atp2a3Q64518 1038 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Scfd2Q8BTY8 684 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pcyt2Q922E4 404 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Stk26Q99JT2 416 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc83Q9D4V3 305 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Arhgap42B2RQE8 841 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ptpn5P54830 541 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc154Q6RUT8 657 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rexo1Q7TT28 1213 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cfap100Q80VN0 613 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ttc5Q99LG4 440 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 PdhbQ9D051 359 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Actr10Q9QZB7 417 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sptbn5F6UCX4 1208 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Me1P06801 572 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nat1P50294 290 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Plcb3P51432 1234 aaKnown RBP9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Smarcad1Q04692 1021 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Lix1lQ8BQ89 337 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cchcr1Q8K2I2 770 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 EhhadhQ9DBM2 718 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms