RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Epn1Q80VP1 575 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Prpf40bQ80W14 870 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Q8C5C9 218 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tmem39aQ9CYC3 486 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Eif4enif1Q9EST3 983 aaKnown RBP11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cxcl11Q9JHH5 100 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gm4307E9PZY4 289 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Kif23E9Q5G3 953 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gm4312K9J7E2 289 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 DSCC1Q14AI0 399 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Lrriq3Q14DL3 633 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Q8C1R3 189 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 RadxQ8C779 850 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tuft1O08970 390 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Zc3h12cQ5DTV4 884 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Krt40Q6IFX3 439 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rasgrp4Q8BTM9 673 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Epha10Q8BYG9 1007 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tmem60Q8K174 133 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gimap7Q8R379 293 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Scrn1Q9CZC8 414 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Calml3Q9D6P8 149 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Letm1Q9Z2I0 738 aa11.02□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ankrd63A2ARS0 390 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Nck2O55033 380 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Lrrc15Q80X72 579 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Card14Q99KF0 999 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cnbd1B1AWM0 430 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Scgb2b19J3QM75 112 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 CltaO08585 235 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Stag2O35638 1231 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 RargP18911 458 aaKnown RBP11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tcp11Q01755 566 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Mum1l1Q4VA55 681 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 GypcQ78HU7 95 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 MtrrQ8C1A3 696 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Znf609Q8BZ47 1413 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Golgb1E9PVZ8 3238 aa11.02□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Celf1P28659 486 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Secisbp2lQ6A098 1086 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ppp2r5bQ6PD28 497 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tekt3Q6X6Z7 490 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Nek5Q7TSC3 627 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Krt222Q8CCX5 294 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 HdlbpQ8VDJ3 1268 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Dbndd2Q9CRD4 158 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Stox1B2RQL2 990 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Slc39a2G3X943 309 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Calm1P0DP26 149 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Calm2P0DP27 149 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Calm3P0DP28 149 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Capza3P70190 299 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Top1Q04750 767 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cfap100Q80VN0 613 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Sh2b1Q91ZM2 756 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Lgr5Q9Z1P4 907 aa11.01□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ddx23D3Z0M9 819 aaKnown RBP11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 PcQ05920 1178 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Aak1Q3UHJ0 959 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Exoc8Q6PGF7 716 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ttc26Q8BS45 554 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Dynll2Q9D0M5 89 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Arpp21Q9DCB4 807 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Lrp5Q91VN0 1614 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Pfkfb3A7UAK5 555 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ppef2O35385 757 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ranbp1P34022 203 aaKnown RBP11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Eif3j1Q3UGC7 261 aaKnown RBP11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Slc9a1Q61165 820 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Eif3j2Q66JS6 263 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Recql4Q75NR7 1216 aaKnown RBP11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ttll4Q80UG8 1193 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Kctd3Q8BFX3 815 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Kif2bQ8C0N1 668 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tmem63cQ8CBX0 802 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Pspc1Q8R326 523 aaKnown RBP11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Eps8l1Q8R5F8 716 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Sh3bp5lQ99LH9 392 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Pex3Q9QXY9 372 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Otud7bB2RUR8 840 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ube4aE9Q735 1028 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Nfil3O08750 462 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gpbp1Q6NXH3 473 aaKnown RBP11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Fermt2Q8CIB5 680 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Spata4Q8K3V1 295 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Lztfl1Q9JHQ5 299 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Trp53inp1Q9QXE4 239 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Abhd2Q9QXM0 425 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ubxn8Q9QZ49 277 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gm11983V9GXS8 105 aa11□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cfap44E9Q5M6 1843 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Krt78E9Q0F0 1068 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Lrrc4bP0C192 709 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ptpn12P35831 775 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Smarcc1P97496 1104 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cdr2P97817 455 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Carmil2Q3V3V9 1296 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ildr1Q8CBR1 537 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Exoc1Q8R3S6 894 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Q91WD4 421 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms