RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Parp1P11103 1013 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Stat1P42225 749 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Stat3P42227 770 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Psmc4P54775 418 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Tbc1d5Q80XQ2 815 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Samm50Q8BGH2 469 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Dpp9Q8BVG4 862 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Zhx2Q8C0C0 836 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ftsj3Q9DBE9 838 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Plcg1Q62077 1302 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Col5a2Q3U962 1497 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Dnaaf5B9EJR8 853 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 CalrP14211 416 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Atp6v1dP57746 247 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kmt5bQ3U8K7 883 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Stxbp3Q60770 592 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Skiv2lQ6NZR5 1244 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 St18Q80TY4 1045 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Dlk2Q8K1E3 382 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Zbed3Q9D0L1 228 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 UncxO08934 530 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Traf1P39428 409 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Acsl1P41216 699 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Islr2Q5RKR3 745 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Sgsm2Q80U12 1005 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Usp44Q8C2S0 711 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kcnj14Q8JZN3 434 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Slc12a8Q8VI23 705 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kdm8Q9CXT6 414 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Arpp21Q9DCB4 807 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Cyp3a59D3Z2W7 503 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Pgk2P09041 417 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ptpn12P35831 775 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Brip1Q5SXJ3 1174 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Zrsr2Q62377 462 aaKnown RBP7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Fbxo11Q7TPD1 930 aaKnown RBP7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Evc2Q8K1G2 1220 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Pidd1Q9ERV7 915 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Zmym2Q9CU65 1376 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kif4P33174 1231 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 SelpQ01102 768 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Btg1-ps1Q3V0S2 161 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Btg1-ps2Q3V0X0 161 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Vmn1r209Q5NC97 312 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Fbxo10Q7TQF2 950 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 PpatQ8CIH9 517 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Paf1Q8K2T8 535 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Mrpl50Q8VDT9 159 aaKnown RBP7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 MsraQ9D6Y7 233 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Hs6st3Q9QYK4 470 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Scn9aQ62205 1984 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kiaa0100Q5SYL3 2234 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 A0A0U1RNP2 1173 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 1700006A11RikB9EHI3 544 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Gm38392E9Q2A2 434 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kcnj4P52189 445 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Kifap3P70188 793 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Lrrc36Q3V0M2 755 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Atad2Q8CDM1 1040 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Mboat7Q8CHK3 473 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Tm4sf4Q91XD3 202 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ngly1Q9JI78 651 aa7.88□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Trim55G3X8Y1 545 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Calm1P0DP26 149 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Calm2P0DP27 149 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Calm3P0DP28 149 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 GnaqP21279 359 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Cdkl5Q3UTQ8 938 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Sez6lQ6P1D5 963 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Nxf7Q80SZ6 620 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Acnat2Q8BGG9 420 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Bri3bpQ8BXV2 253 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 SdsQ8VBT2 327 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ddx39aQ8VDW0 427 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 NkapQ9D0F4 415 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Med23Q80YQ2 1367 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Mmp14P53690 582 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Slc44a1Q6X893 653 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Cwc15Q9JHS9 229 aaKnown RBP7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Myo19Q5SV80 963 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 LrmpQ60664 539 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Cyp2c29Q64458 490 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 1700010I14RikQ7TPG0 532 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Sh3bgrQ9WUZ7 214 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Btbd19S4R1I0 287 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 BcorQ8CGN4 1759 aa7.87□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Nme9A0A1L1SUL6 329 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Gm11549A0A286YD83 63 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 OatP29758 439 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Elf1Q60775 612 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Pgrmc2Q80UU9 217 aaKnown RBP7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Tpcn2Q8BWC0 731 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Bola3Q8CEI1 110 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Champ1Q8K327 802 aaKnown RBP7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Mad2l2Q9D752 211 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Gpaa1Q9WTK3 621 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Polr2aP08775 1970 aaKnown RBP7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ncaph2Q8BSP2 607 aa7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 SltmQ8CH25 1031 aaKnown RBP7.86□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Tmem191cQ9JJB1 302 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms