RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Pdcl2Q78Y63 240 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Necab1Q8BG18 352 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 SpidrQ8BGX7 933 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Plekhg6Q8R0J1 787 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Scrn1Q9CZC8 414 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Mis18aQ9CZJ6 204 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Cbx6Q9DBY5 414 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 StrcQ8VIM6 1809 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Znf609Q8BZ47 1413 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tbc1d2B1AVH7 922 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Flvcr1B2RXV4 560 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Kif23E9Q5G3 953 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Klrk1O54709 232 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 NppbP40753 121 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Frat1P70339 274 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 MyrflQ3UN70 904 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 L1td1Q587J6 782 aaKnown RBP9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Clca4aQ6Q473 924 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ankk1Q8BZ25 745 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Slc4a8Q8JZR6 1089 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ddx27Q921N6 760 aaKnown RBP9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Thap2Q9D305 217 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tjap1Q9DCD5 539 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Myh7bA2AQP0 1941 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Zscan18E9PUD6 809 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tal1P22091 329 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 SsbP32067 415 aaKnown RBP9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nucb2P81117 420 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Grm4Q68EF4 912 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Setdb2Q8C267 713 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Pde5aQ8CG03 865 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Pspc1Q8R326 523 aaKnown RBP9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Txndc5Q91W90 417 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Saal1Q9D2C2 474 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Cyp2ab1S4R196 498 aa9.6□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Card6E9PWH2 1175 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Vmn2r68L7N2B3 851 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Cdk4P30285 303 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Slc7a1Q09143 622 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Kiaa1468Q148V7 1216 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Cep135Q6P5D4 1140 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Bbs9Q811G0 885 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Dnm3Q8BZ98 863 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Smc2Q8CG48 1191 aaKnown RBP9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 E2f4Q8R0K9 410 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Trub2Q91WG3 331 aaKnown RBP9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Mtmr4Q91XS1 1190 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Galntl5Q9D4M9 431 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Pex3Q9QXY9 372 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Col1a1P11087 1453 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nup188Q6ZQH8 1759 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ugt1a8D3Z748 530 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ugt1a10E9PXN7 530 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Znf568E9PYI1 671 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Aco1P28271 889 aaKnown RBP9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tnni3kQ5GIG6 834 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ptrh1Q8BW00 204 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Arhgef19Q8BWA8 802 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Klhl30Q8C3F7 581 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 LpxnQ99N69 386 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tulp1Q9Z273 543 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Phrf1A6H619 1682 aa9.59□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Arhgap4B1AUY3 965 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Hoxd11P23813 323 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 DSCC1Q14AI0 399 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Nell2Q61220 819 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Haus6Q6NV99 933 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Atp2b4Q6Q477 1205 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gys2Q8VCB3 704 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Arl8aQ8VEH3 186 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Mmtag2Q99LX5 260 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ccdc94Q9D6J3 314 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Sorbs3Q9R1Z8 733 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cyp26c1B2RXA7 518 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Krt78E9Q0F0 1068 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Arid4aF8VPQ2 1261 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Api5O35841 504 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 PRAG1Q571I4 1179 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ezh2Q61188 746 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ovgp1Q62010 721 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Insm1Q63ZV0 521 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gpbp1Q6NXH3 473 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ppp2r5bQ6PD28 497 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 GypcQ78HU7 95 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Nat10Q8K224 1024 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 AdpgkQ8VDL4 496 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cd274Q9EP73 290 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Nrxn2E9Q7X7 1710 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ces1aE9PYP1 563 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gm4307E9PZY4 289 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ifi207E9Q3L4 978 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gm4312K9J7E2 289 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Sept2P42208 361 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Eif5P59325 429 aaKnown RBP9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Hdac4Q6NZM9 1076 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Pip5kl1Q6U7H8 395 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Asnsd1Q8BFS9 627 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Vps53Q8CCB4 832 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Mtmr6Q8VE11 617 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 BaatQ91X34 420 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms