RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Triml1Q8BVP1 470 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 RadxQ8C779 850 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Prpf6Q91YR7 941 aaKnown RBP15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Calml3Q9D6P8 149 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Lztfl1Q9JHQ5 299 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Snapc4Q8BP86 1333 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Scgb2b11A0A087WR49 112 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cyp26c1B2RXA7 518 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Mars2Q499X9 586 aaKnown RBP15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Sept9Q80UG5 583 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Susd4Q8BH32 490 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Rbm19Q8R3C6 952 aaKnown RBP15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Lonrf3Q9D4H7 753 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Dctn1O08788 1281 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 ByslO54825 436 aaKnown RBP15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Ildr1Q8CBR1 537 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Tmem63cQ8CBX0 802 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Ccdc83Q9D4V3 305 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Dnajc7Q9QYI3 494 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Sorbs3Q9R1Z8 733 aa15.09■□□□□ 0.01
Nup88-201ENSMUST00000035283 Api5O35841 504 aaKnown RBP15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Capza3P70190 299 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Ppp1r7Q3UM45 361 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Sema4bQ62179 823 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 GypcQ78HU7 95 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Znf131Q8K3J5 619 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Eps8l1Q8R5F8 716 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Apopt1Q9CQW7 192 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Mss51Q9D5Z5 446 aa15.08■□□□□ 0.01
Nup88-201ENSMUST00000035283 Znf638Q61464 1960 aaKnown RBP15.08■□□□□ 0
Nup88-201ENSMUST00000035283 4931408C20RikE9PWP9 1381 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Ecm29Q6PDI5 1840 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Apol7aB2RT54 418 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Serpina16D3Z660 418 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Casp1P29452 402 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Nr5a1P33242 462 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 PpardP35396 440 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Dnm2P39054 870 aaKnown RBP15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Klra4Q60651 263 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Usp50Q6P8X6 390 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Tango6Q8C3S2 1079 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Trim29Q8R2Q0 587 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 MlphQ91V27 590 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Fbxo3Q9DC63 480 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Bcl9lQ67FY2 1494 aa15.08■□□□□ 0
Nup88-201ENSMUST00000035283 Skap2Q3UND0 358 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Rc3h1Q4VGL6 1130 aaKnown RBP15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Antxr2Q6DFX2 487 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 QarsQ8BML9 775 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Zdhhc14Q8BQQ1 489 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Ubxn8Q9QZ49 277 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Akap2O54931 893 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Stim1P70302 685 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Secisbp2lQ6A098 1086 aaKnown RBP15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Papd7Q6PB75 542 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Nop9Q8BMC4 636 aaKnown RBP15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Slc39a11Q8BWY7 342 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Tmem60Q8K174 133 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Pspc1Q8R326 523 aaKnown RBP15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Myh13B1AR69 1938 aa15.07■□□□□ 0
Nup88-201ENSMUST00000035283 Pet2A2AHY8 747 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Prr5lA2AVJ5 370 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Folh1O35409 752 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 GabrdP22933 449 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Tubb5P99024 444 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Ezh2Q61188 746 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Ppp2r5bQ6PD28 497 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Txndc16Q7TN22 820 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Lrrc15Q80X72 579 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Cep95Q8BVV7 827 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Fermt2Q8CIB5 680 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Adcy3Q8VHH7 1145 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 PpanQ91YU8 470 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Ddx23D3Z0M9 819 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Fkbp1aP26883 108 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Gfpt1P47856 697 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Ddx3yQ62095 658 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Aggf1Q7TN31 711 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Sdad1Q80UZ2 687 aaKnown RBP15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Vipas39Q8BGQ1 491 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 Q91WD4 421 aa15.06■□□□□ 0
Nup88-201ENSMUST00000035283 PfasQ5SUR0 1337 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Snx12O70493 165 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Stx8O88983 236 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Stat5bP42232 786 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Wee1P47810 646 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Carmil2Q3V3V9 1296 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Ctr9Q62018 1173 aaKnown RBP15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Tldc1Q8K0P3 455 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Matr3Q8K310 846 aaKnown RBP15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Ribc1Q9D0B8 379 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Gpaa1Q9WTK3 621 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Lrp5Q91VN0 1614 aa15.05■□□□□ 0
Nup88-201ENSMUST00000035283 Gm5934D3Z4U6 212 aa15.05■□□□□ -0
Nup88-201ENSMUST00000035283 Ccdc38Q8CDN8 563 aa15.05■□□□□ -0
Nup88-201ENSMUST00000035283 Tmem134Q8R0J4 195 aa15.05■□□□□ -0
Nup88-201ENSMUST00000035283 EpgnQ924X1 152 aa15.05■□□□□ -0
Nup88-201ENSMUST00000035283 ThegQ9JMB1 375 aa15.05■□□□□ -0
Nup88-201ENSMUST00000035283 Ube3aO08759 870 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Parp1P11103 1013 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms