RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Cd3dP04235 173 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Tbc1d2bQ3U0J8 965 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Traf3ip3Q8C0G2 513 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Tmx4Q8C0L0 335 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Tsnaxip1Q99P25 704 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Rapgef4Q9EQZ6 1011 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Scgb2b18A0A087WPA9 112 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Usp5P56399 858 aaKnown RBP16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Card10P58660 1021 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 ItgadQ3V0T4 1168 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Q8C5C9 218 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Calml3Q9D6P8 149 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 2310002L09RikQ9D7L5 217 aa16.88■□□□□ 0.29
Usp4-201ENSMUST00000035237 Slc7a3P70423 618 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 NeblQ0II04 452 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Ccdc157Q5SPX1 718 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Gpbp1Q6NXH3 473 aaKnown RBP16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Sgpp1Q9JI99 430 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Trpm3Q5F4S9 1721 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 DgkiD3YWQ0 1071 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 C2cd2E9Q3C1 696 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Gnat2P50149 354 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Ppp1r21Q3TDD9 780 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Erich4Q3UNU4 136 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Gpr108Q91WD0 569 aa16.87■□□□□ 0.29
Usp4-201ENSMUST00000035237 Casp12O08736 419 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Cyp3a25O09158 503 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Podxl2Q8CAE9 603 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 F13a1Q8BH61 732 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 CpvlQ9D3S9 478 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Pkd2l2Q9JLG4 621 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Sept1P42209 366 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Slf2Q6P9P0 1278 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Cct8l1Q80YT3 562 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Lrrc59Q922Q8 307 aaKnown RBP16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 NsmfQ99NF2 532 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Sept14Q9DA97 430 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Arpp21Q9DCB4 807 aa16.86■□□□□ 0.29
Usp4-201ENSMUST00000035237 Cul4bA2A432 970 aaKnown RBP16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Eva1cP58659 440 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 RragaQ80X95 313 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 GopcQ8BH60 463 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 GzmnQ920S1 248 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Klhl7Q8BUL5 586 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Fermt3Q8K1B8 665 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Stn1Q8K2X3 378 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 TxlnbQ8VBT1 685 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Mx1P09922 631 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Nlrp2Q4PLS0 1046 aaKnown RBP16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Ezh2Q61188 746 aaKnown RBP16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Ddx3yQ62095 658 aaKnown RBP16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 CutaQ9CQ89 177 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Klc4Q9DBS5 619 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 Col20a1Q923P0 1320 aa16.85■□□□□ 0.29
Usp4-201ENSMUST00000035237 VimP20152 466 aaKnown RBP16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 EsrrbQ61539 433 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Smarca1Q6PGB8 1046 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Kif1bpQ6ZPU9 617 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Rasgrp4Q8BTM9 673 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Sash3Q8K352 380 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 EpgnQ924X1 152 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Eps8l2Q99K30 729 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Ccdc105Q9D4K7 499 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Gkap1Q9JMB0 366 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Pex3Q9QXY9 372 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 1700017N19RikA0A087WPJ1 469 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Snx12O70493 165 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Wee1P47810 646 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Spata16Q8C636 571 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Calcoco1Q8CGU1 691 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Dnai2A2AC93 623 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Ddx23D3Z0M9 819 aaKnown RBP16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 GpiP06745 558 aaKnown RBP16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Sec31aQ3UPL0 1230 aaKnown RBP16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 HrQ61645 1182 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 BbxQ8VBW5 907 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 PdhbQ9D051 359 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 ParvgQ9ERD8 331 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Mapk8ip1Q9WVI9 707 aa16.84■□□□□ 0.29
Usp4-201ENSMUST00000035237 Tcp10bE9PYJ0 438 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Gucy1a2F8VQK3 730 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Nfil3O08750 462 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Dctn1O08788 1281 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Gja3Q64448 417 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Maip1Q8BHE8 291 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Usp15Q8R5H1 981 aa16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Luc7lQ9CYI4 371 aaKnown RBP16.83■□□□□ 0.29
Usp4-201ENSMUST00000035237 Bicdl1A0JNT9 577 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Cyp19a1P28649 503 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Stim2P83093 746 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Lrrfip1Q3UZ39 729 aaKnown RBP16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tekt3Q6X6Z7 490 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Dclk3Q8BWQ5 790 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 MtrrQ8C1A3 696 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 FliiQ9JJ28 1271 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Peg12Q9WVA7 283 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Klra1P20937 262 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Naa15Q80UM3 865 aaKnown RBP16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tmem63cQ8CBX0 802 aa16.83■□□□□ 0.28
Usp4-201ENSMUST00000035237 NgdnQ9DB96 315 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms