RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pabpc4Q6PHQ9 660 aaKnown RBP11.15□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ddx42Q810A7 929 aaKnown RBP11.15□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ushbp1Q8R370 680 aa11.15□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Apopt1Q9CQW7 192 aa11.15□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Mfap3lQ9D3X9 409 aa11.15□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Tfcp2Q9ERA0 502 aa11.15□□□□□ -0.63
Ubr1-201ENSMUST00000028728 PodnQ7TQ62 611 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Snip1Q8BIZ6 383 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dr1Q91WV0 176 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Psma8Q9CWH6 250 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Bbs5Q9CZQ9 341 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dydc2Q9D3X8 139 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 PxdnQ3UQ28 1475 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Taf4E9QAP7 1042 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Eef1bO70251 225 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Tcp11Q01755 566 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc27a1Q60714 646 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ptpn14Q62130 1189 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Birc2Q62210 612 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 GopcQ8BH60 463 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 MgarpQ8VI64 283 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Plekhg1F6S200 1446 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Prl3d1P18121 224 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 CoilQ5SU73 570 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 CopeO89079 308 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dnajc8Q6NZB0 253 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Daam2Q80U19 1115 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccdc78D3Z5T1 437 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 DSCC1Q14AI0 399 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cnga4Q3UW12 575 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccdc125Q5U465 500 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Myl10Q62082 202 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 AticQ9CWJ9 592 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Eif4g3Q80XI3 1579 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nup160Q9Z0W3 1402 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm28043E0CXC2 719 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Casp8O89110 480 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Zdhhc9P59268 364 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Eif4a1P60843 406 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ankrd6Q69ZU8 712 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Bend3Q6PAL0 825 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Actr5Q80US4 605 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc17a8Q8BFU8 601 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cttnbp2nlQ99LJ0 638 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dph6Q9CQ28 267 aa11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Foxp4Q9DBY0 795 aaKnown RBP11.14□□□□□ -0.63
Ubr1-201ENSMUST00000028728 4932429P05RikA2ADI4 785 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Esyt2Q3TZZ7 845 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 NfkbibQ60778 359 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nab2Q61127 525 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Clec16aQ80U30 1036 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Med14A2ABV5 1459 aaKnown RBP11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Lamc1P02468 1607 aaKnown RBP11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 1700017N19RikA0A087WPJ1 469 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Atf5O70191 283 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cog7Q3UM29 770 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kctd16Q5DTY9 427 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gucy2fQ5SDA5 1108 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Krt74Q6IFZ9 495 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nfil3O08750 462 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kiaa1468Q148V7 1216 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Krt12Q64291 487 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rcor2Q8C796 523 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Arl8aQ8VEH3 186 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Pcdhb15Q91Y04 786 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 KynuQ9CXF0 464 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 A0A1W2P6Q8 802 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm9048A0A1W2P7H4 802 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 A0A1W2P7Z8 802 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm9046A0A1W2P855 802 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kif5aP33175 1027 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Znf18Q810A1 556 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dmrt2Q8BG36 561 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Klf15Q9EPW2 415 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 LratQ9JI60 231 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Pdzd4Q9QY39 772 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Med23Q80YQ2 1367 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 NpatQ8BMA5 1420 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Prrc2bQ7TPM1 1486 aaKnown RBP11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm5580A0A0N4SVP8 411 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 DgkiD3YWQ0 1071 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ncf1Q09014 390 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Tmem87aQ8BXN9 555 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Zfp317Q8C0Q5 607 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Stx12Q9ER00 274 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cbx8Q9QXV1 362 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm30191A0A0U1RNT7 187 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 IkbkgO88522 412 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Pram1Q6BCL1 675 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Stoml1Q8CI66 399 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Abcc4E9Q236 1325 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Mbd5B1AYB6 1498 aa11.13□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm4297D3YWB7 211 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gna15P30678 374 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Edc3Q8K2D3 508 aaKnown RBP11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dph5Q9CWQ0 281 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 EhhadhQ9DBM2 718 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Lonrf2B2RT44 518 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nr1i2O54915 431 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Hcls1P49710 486 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 125.6 ms