RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Tab2Q99K90 693 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rsph3bQ9DA80 389 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Nckap5lQ6GQX2 1323 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Apol11aE9PZG0 334 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pde1bQ01065 535 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Fam228bQ497Q6 232 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Trim17Q7TPM3 477 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mei4Q8BRM6 389 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Olfm5Q8BU90 496 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 9230110C19RikQ8CC70 267 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ulbp1Q8HWA3 334 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Sh2b1Q91ZM2 756 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tubgcp2Q921G8 905 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Eid1Q9DCR4 169 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Hace1Q3U0D9 909 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cnga4Q3UW12 575 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Enox1Q8BHR2 643 aaKnown RBP11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tsnaxip1Q99P25 704 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 TfrcQ62351 763 aaKnown RBP11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ccdc28aQ8CEI3 192 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Phkg2Q9DB30 406 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pde11aP0C1Q2 933 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mdh1P14152 334 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cct5P80316 541 aaKnown RBP11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ubxn10Q8BG34 277 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pcdhb15Q91Y04 786 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Usp42B2RQC2 1324 aaKnown RBP11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tmtc2Q56A06 836 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Prkab2Q6PAM0 271 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 HomezQ80W88 542 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ankfy1Q810B6 1169 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 MycbpQ9EQS3 103 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gm30191A0A0U1RNT7 187 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cpsf2O35218 782 aaKnown RBP11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pfdn6Q03958 127 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rapgef5Q8C0Q9 814 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Lrrd1Q8C0R9 853 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Lrrc2Q8VDB8 371 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gpr108Q91WD0 569 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ccdc97Q9DBT3 340 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 InsrrQ9WTL4 1300 aa11.91□□□□□ -0.5
Ciita-201ENSMUST00000023147 Dip2aQ8BWT5 1523 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Apol7bB1AQP7 369 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Xbp1O35426 267 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 LdhaP06151 332 aaKnown RBP11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Dnm2P39054 870 aaKnown RBP11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ccdc189Q6NZQ0 333 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tmtc4Q8BG19 741 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pak2Q8CIN4 524 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gbp6A0A0G2JDV3 611 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gm43302L7N1X8 611 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Abcb4P21440 1276 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Dnajc5P60904 198 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mum1l1Q4VA55 681 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 DbnlQ62418 436 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Atp2b4Q6Q477 1205 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ifih1Q8R5F7 1025 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ttc14Q9CSP9 761 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Myl3P09542 204 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Drc1Q3USS3 753 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ddx49Q4FZF3 480 aaKnown RBP11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Nxf7Q80SZ6 620 aaKnown RBP11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Lztfl1Q9JHQ5 299 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 EcsitQ9QZH6 435 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tex13c2A0A0G2JGA3 530 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Flot1O08917 428 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Surf6P70279 355 aaKnown RBP11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Fam47cQ14BE7 430 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 ThrspQ62264 150 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Znf532Q6NXK2 1036 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cracr2bQ80ZJ8 394 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Q8R1Y2 203 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 Calr3Q9D9Q6 380 aa11.9□□□□□ -0.5
Ciita-201ENSMUST00000023147 CltaO08585 235 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 MycbpapQ5SUV2 932 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppp2r5cQ60996 524 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ube2oQ6ZPJ3 1288 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Desi2Q9D291 194 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 LratQ9JI60 231 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ccnl1Q52KE7 532 aaKnown RBP11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Kif2bQ8C0N1 668 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Bola3Q8CEI1 110 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Kiaa1024Q8K3V7 917 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Strn3Q9ERG2 796 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Arhgef28P97433 1693 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Dnajc25A2ALW5 357 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Evi5P97366 809 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Rassf10Q8BL43 508 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 LgsnQ8CIX8 563 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Atp6v0a4Q920R6 833 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Nsmce1Q9D720 266 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pdzd9Q9D9M4 266 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Satb1Q60611 764 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Dhx40Q6PE54 779 aaKnown RBP11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cep85Q8BMK0 761 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Zkscan8Q8BSL0 588 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pcdha7Q91Y13 937 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ciao1Q99KN2 339 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cbx6Q9DBY5 414 aa11.89□□□□□ -0.51
Ciita-201ENSMUST00000023147 Sh3tc1G3X9F6 1346 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms