RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Pramel3A2AHA7 463 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Gm7903A2AWL1 463 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 AV320801A2AWL3 467 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Gm15023L7MUB4 467 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Gpr162Q3UN16 588 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Cdkl5Q3UTQ8 938 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Usp50Q6P8X6 390 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Frat2Q8K025 231 aa23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 AatfQ9JKX4 526 aaKnown RBP23.16■■□□□ 1.3
Trim47-201ENSMUST00000021120 Gm43638A0A0J9YU36 694 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 Gm20425E9Q035 978 aaKnown RBP23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 SrprbP47758 269 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 Traf3ip1Q149C2 625 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 LrmpQ60664 539 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 Dpp8Q80YA7 892 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 Ppp1r11Q8K1L5 131 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 Tnip1Q9WUU8 647 aa23.15■■□□□ 1.3
Trim47-201ENSMUST00000021120 Dcdc2bF7BCK0 340 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Serpinb6bO08804 377 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Fam196bQ6GQV1 535 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Tacc1Q6Y685 774 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Terf2ipQ91VL8 393 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Pcdhgc5Q91XW9 944 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Klrc1Q9Z202 244 aa23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Ktn1Q61595 1327 aaKnown RBP23.14■■□□□ 1.3
Trim47-201ENSMUST00000021120 Ncf1Q09014 390 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Kmt5bQ3U8K7 883 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Lman1lQ8VCD3 505 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Glis2Q8VDL9 521 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Filip1Q9CS72 1211 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Clic4Q9QYB1 253 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Col2a1P28481 1487 aa23.14■■□□□ 1.29
Trim47-201ENSMUST00000021120 Calm1P0DP26 149 aaKnown RBP23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Calm2P0DP27 149 aaKnown RBP23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Calm3P0DP28 149 aaKnown RBP23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 NogP97466 232 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Scg2Q03517 617 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 AcrbpQ3V140 540 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Pip5kl1Q6U7H8 395 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Phf20l1Q8CCJ9 1013 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 OplahQ8K010 1288 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Shtn1Q8K2Q9 631 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Gbp7Q91Z40 638 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Styxl1Q9DAR2 321 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Stk32bQ9JJX8 414 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Cacna1fQ9JIS7 1985 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ccng2O08918 344 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Akap2O54931 893 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Foxp1P58462 705 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Tmem39bQ810L4 492 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Hps3Q91VB4 1002 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Stk38Q91VJ4 465 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ascc2Q91WR3 749 aa23.13■■□□□ 1.29
Trim47-201ENSMUST00000021120 1700017N19RikA0A087WPJ1 469 aa23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Clrn2B2RVW2 232 aa23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Usp5P56399 858 aaKnown RBP23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Irx2P81066 474 aa23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 U2af1l4Q8BGJ9 220 aa23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Kri1Q8VDQ9 704 aaKnown RBP23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ddx27Q921N6 760 aaKnown RBP23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Sptlc2P97363 560 aaKnown RBP23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Tmtc2Q56A06 836 aa23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Abcf1Q6P542 837 aaKnown RBP23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Etf1Q8BWY3 437 aaKnown RBP23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Rtn1Q8K0T0 780 aa23.12■■□□□ 1.29
Trim47-201ENSMUST00000021120 Myh14Q6URW6 2000 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Klrg2Q3UM83 387 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Oog3Q3UWY1 500 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Cnot7Q60809 285 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Trak2Q6P9N8 913 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ift74Q8BKE9 600 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Mei4Q8BRM6 389 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Lonrf3Q9D4H7 753 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Grin2dQ03391 1323 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 TicrrQ8BQ33 1889 aa23.11■■□□□ 1.29
Trim47-201ENSMUST00000021120 Alppl2P24823 529 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ppp2r5bQ6PD28 497 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Zfp202Q8C879 641 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Gimap7Q8R379 293 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Tmem47Q9JJG6 181 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Stxbp4Q9WV89 557 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Cdc45Q9Z1X9 566 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Gm28047Q3US59 414 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Mad2l2Q9D752 211 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Dpp7Q9ET22 506 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 Nek3Q9R0A5 511 aa23.1■■□□□ 1.29
Trim47-201ENSMUST00000021120 1700013D24RikQ0P521 120 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Kif1bpQ6ZPU9 617 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ranbp6Q8BIV3 1105 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 SdsQ8VBT2 327 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Tomm22Q9CPQ3 142 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Trmt112Q9DCG9 125 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Zranb2Q9R020 330 aaKnown RBP23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Gm11983V9GXS8 105 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Chrm1P12657 460 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Mybl2P48972 704 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Llgl2Q3TJ91 1027 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Psen2Q61144 448 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Glra4Q61603 456 aa23.09■■□□□ 1.29
Trim47-201ENSMUST00000021120 Ccp110Q7TSH4 1004 aa23.09■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms