RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gas7Q60780 421 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tsr2Q8C8T8 191 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kat14Q8CID0 779 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Slc4a8Q8JZR6 1089 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mlh1Q9JK91 760 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Supt6hQ62383 1726 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm28043E0CXC2 719 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ift81O35594 676 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Eif3dO70194 548 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Xrcc5P27641 732 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gpc4P51655 557 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Fam207aP58468 219 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Apol10aQ8CCA5 318 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Atad2Q8CDM1 1040 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Utp11Q9CZJ1 253 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 ChmQ9QXG2 665 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kdm6aO70546 1401 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Serpinb6eI7HJI3 429 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zc3h18Q0P678 948 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cdc37Q61081 379 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Jarid2Q62315 1234 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mknk2Q8CDB0 459 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nr1i2O54915 431 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Atf2P16951 487 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 F2rP30558 430 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Spata18Q0P557 537 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zscan22Q8BGS5 496 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cabcoco1Q8CDT7 208 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Enox2Q8R0Z2 598 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ushbp1Q8R370 680 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kif2cQ922S8 721 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Usp19Q3UJD6 1360 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pik3caP42337 1068 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pfkfb1P70266 471 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zbtb38Q3LR78 1197 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zbtb7bQ64321 544 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 PicalmQ7M6Y3 660 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 D130040H23RikQ8BII3 405 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Klhl38Q8BSF5 581 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Svs3bQ8BZH8 265 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nod2Q8K3Z0 1020 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Prc1Q99K43 603 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Saal1Q9D2C2 474 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Dpp7Q9ET22 506 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 DexiQ9WUQ7 95 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm43638A0A0J9YU36 694 aa10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mroh9G5E8L9 891 aa10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Krt19P19001 403 aa10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ccdc50Q810U5 305 aaKnown RBP10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Arhgap29Q8CGF1 1266 aa10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 SmtnQ921U8 923 aa10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Lrp2bpQ9D4C6 346 aa10.02□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zmynd8A2A484 1235 aaKnown RBP10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Bin2D3Z6Q9 489 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Olfr247E9PVJ7 320 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Olfr819K7N727 320 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 DSCC1Q14AI0 399 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Trim71Q1PSW8 855 aaKnown RBP10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cog7Q3UM29 770 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lrrc8aQ80WG5 810 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Nxf1Q99JX7 618 aaKnown RBP10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Med10Q9CXU0 135 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 NkapQ9D0F4 415 aaKnown RBP10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Dctpp1Q9QY93 170 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Irx1P81068 480 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Efcab14Q8BGQ6 484 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lmbrd2Q8C561 694 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ttc4Q8R3H9 386 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ccdc92Q8VDN4 314 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 MrgbpQ9DAT2 204 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Popdc2Q9ES82 367 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Atg4a-psA0A0G2JFS9 396 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pcdha4O88689 947 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 LdhbP16125 334 aaKnown RBP10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ccdc138Q0VF22 680 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 BcrQ6PAJ1 1270 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Impg2Q80XH2 1243 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cct8l1Q80YT3 562 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tmtc4Q8BG19 741 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Atg4aQ8C9S8 396 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Scyl2Q8CFE4 930 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tbx22Q8K402 517 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Dach1Q9QYB2 751 aa10.02□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Trim5E9PV98 497 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 NsfP46460 744 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Q80ZQ3 298 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Nkiras1Q8CEC5 192 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cd209bQ8CJ91 325 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ppp4r1Q8K2V1 951 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Dtnbp1Q91WZ8 352 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tspan17Q9D7W4 270 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 1700109H08RikQ9D9C0 210 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Scyl1Q9EQC5 806 aaKnown RBP10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gm6588E9Q3K0 461 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Parp2O88554 559 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 GsnP13020 780 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mtx1P47802 317 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 AdkP55264 361 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Stx1bP61264 288 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Igflr1Q3U4N7 345 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms