RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A MSH2P25847 964 aa15.7■□□□□ 0.1
TRN1tP(UGG)A HRR25P29295 494 aaKnown RBP15.7■□□□□ 0.1
TRN1tP(UGG)A TOM20P35180 183 aa15.7■□□□□ 0.1
TRN1tP(UGG)A PHO11P35842 467 aa15.7■□□□□ 0.1
TRN1tP(UGG)A DCW1P36091 449 aa15.7■□□□□ 0.1
TRN1tP(UGG)A YBR259WP38338 688 aa15.7■□□□□ 0.1
TRN1tP(UGG)A PHO12P38693 467 aa15.7■□□□□ 0.1
TRN1tP(UGG)A LRP1P38801 184 aaKnown RBP15.7■□□□□ 0.1
TRN1tP(UGG)A YJL206CP39529 758 aa15.7■□□□□ 0.1
TRN1tP(UGG)A ALG8P40351 577 aa15.7■□□□□ 0.1
TRN1tP(UGG)A DSN1P40568 576 aa15.7■□□□□ 0.1
TRN1tP(UGG)A NUP84P52891 726 aa15.7■□□□□ 0.1
TRN1tP(UGG)A BUD32P53323 261 aa15.7■□□□□ 0.1
TRN1tP(UGG)A RPC11Q04307 110 aaPredicted RBP15.7■□□□□ 0.1
TRN1tP(UGG)A FAR8Q05040 523 aa15.7■□□□□ 0.1
TRN1tP(UGG)A SLP1Q12232 587 aa15.7■□□□□ 0.1
TRN1tP(UGG)A GLN4P13188 809 aaKnown RBP15.69■□□□□ 0.1
TRN1tP(UGG)A YCR051WP25631 222 aa15.69■□□□□ 0.1
TRN1tP(UGG)A YCR099CP25657 155 aa15.69■□□□□ 0.1
TRN1tP(UGG)A GCD11P32481 527 aaKnown RBP15.69■□□□□ 0.1
TRN1tP(UGG)A SET3P36124 751 aa15.69■□□□□ 0.1
TRN1tP(UGG)A ACO2P39533 789 aa15.69■□□□□ 0.1
TRN1tP(UGG)A AQR1P53943 586 aa15.69■□□□□ 0.1
TRN1tP(UGG)A KCS1Q12494 1050 aa15.69■□□□□ 0.1
TRN1tP(UGG)A PMT1P33775 817 aa15.68■□□□□ 0.1
TRN1tP(UGG)A RRP14P36080 434 aaKnown RBP15.68■□□□□ 0.1
TRN1tP(UGG)A PEP8P40335 379 aa15.68■□□□□ 0.1
TRN1tP(UGG)A YMR209CQ03648 457 aa15.68■□□□□ 0.1
TRN1tP(UGG)A TDA5Q06417 326 aaKnown RBP15.68■□□□□ 0.1
TRN1tP(UGG)A NCA2Q12374 616 aa15.68■□□□□ 0.1
TRN1tP(UGG)A YMR030W-AQ3E760 96 aa15.68■□□□□ 0.1
TRN1tP(UGG)A SPS1P08458 490 aa15.67■□□□□ 0.1
TRN1tP(UGG)A MRPL9P31334 269 aa15.67■□□□□ 0.1
TRN1tP(UGG)A BEM3P32873 1128 aa15.67■□□□□ 0.1
TRN1tP(UGG)A HXT5P38695 592 aa15.67■□□□□ 0.1
TRN1tP(UGG)A FMO1P38866 432 aa15.67■□□□□ 0.1
TRN1tP(UGG)A HOS4P40480 1083 aa15.67■□□□□ 0.1
TRN1tP(UGG)A FRE4P53746 719 aa15.67■□□□□ 0.1
TRN1tP(UGG)A SMA1Q02651 245 aa15.67■□□□□ 0.1
TRN1tP(UGG)A CLU1Q03690 1277 aaKnown RBP15.67■□□□□ 0.1
TRN1tP(UGG)A HRK1Q08732 759 aaKnown RBP15.67■□□□□ 0.1
TRN1tP(UGG)A RGS2Q99188 309 aa15.67■□□□□ 0.1
TRN1tP(UGG)A UBA1P22515 1024 aaKnown RBP15.66■□□□□ 0.1
TRN1tP(UGG)A YHR078WP38799 552 aa15.66■□□□□ 0.1
TRN1tP(UGG)A YLR177WQ06251 628 aa15.66■□□□□ 0.1
TRN1tP(UGG)A TGL5Q12043 749 aa15.66■□□□□ 0.1
TRN1tP(UGG)A NUS1Q12063 375 aa15.66■□□□□ 0.1
TRN1tP(UGG)A HOM2P13663 365 aaKnown RBP15.65■□□□□ 0.1
TRN1tP(UGG)A GUT2P32191 649 aa15.65■□□□□ 0.1
TRN1tP(UGG)A YSW1P38280 609 aa15.65■□□□□ 0.1
TRN1tP(UGG)A SRP72P38688 640 aaKnown RBP15.65■□□□□ 0.1
TRN1tP(UGG)A LIN1P38852 340 aaPredicted RBP15.65■□□□□ 0.1
TRN1tP(UGG)A MNN1P39106 762 aa15.65■□□□□ 0.1
TRN1tP(UGG)A TIM17P39515 158 aa15.65■□□□□ 0.1
TRN1tP(UGG)A RPH1P39956 796 aa15.65■□□□□ 0.1
TRN1tP(UGG)A IRR1P40541 1150 aa15.65■□□□□ 0.1
TRN1tP(UGG)A SET2P46995 733 aaKnown RBP15.65■□□□□ 0.1
TRN1tP(UGG)A LIA1P47120 325 aaKnown RBP15.65■□□□□ 0.1
TRN1tP(UGG)A CWC24P53769 259 aa15.65■□□□□ 0.1
TRN1tP(UGG)A ARP4P80428 489 aa15.65■□□□□ 0.1
TRN1tP(UGG)A CIA1Q05583 330 aa15.65■□□□□ 0.1
TRN1tP(UGG)A NUT2Q06213 157 aa15.65■□□□□ 0.1
TRN1tP(UGG)A GCY1P14065 312 aaKnown RBP RIP-Chip data15.64■□□□□ 0.09not detected
TRN1tP(UGG)A GAL11P19659 1081 aa15.64■□□□□ 0.09
TRN1tP(UGG)A AMD2P22580 549 aa15.64■□□□□ 0.09
TRN1tP(UGG)A KIP2P28743 706 aa15.64■□□□□ 0.09
TRN1tP(UGG)A CIN4P39110 191 aa15.64■□□□□ 0.09
TRN1tP(UGG)A GTS1P40956 396 aa15.64■□□□□ 0.09
TRN1tP(UGG)A IME4P41833 600 aa15.64■□□□□ 0.09
TRN1tP(UGG)A YJL107CP42947 387 aa15.64■□□□□ 0.09
TRN1tP(UGG)A SWC4P53201 476 aa15.64■□□□□ 0.09
TRN1tP(UGG)A OSH6Q02201 448 aa15.64■□□□□ 0.09
TRN1tP(UGG)A TAF11Q04226 346 aa15.64■□□□□ 0.09
TRN1tP(UGG)A STE2D6VTK4 431 aa15.63■□□□□ 0.09
TRN1tP(UGG)A SIS1P25294 352 aaKnown RBP15.63■□□□□ 0.09
TRN1tP(UGG)A HCM1P25364 564 aa15.63■□□□□ 0.09
TRN1tP(UGG)A AAD3P25612 363 aa15.63■□□□□ 0.09
TRN1tP(UGG)A STB6P36085 766 aa15.63■□□□□ 0.09
TRN1tP(UGG)A TAE1P38340 232 aa15.63■□□□□ 0.09
TRN1tP(UGG)A STN1P38960 494 aa15.63■□□□□ 0.09
TRN1tP(UGG)A PIK1P39104 1066 aa15.63■□□□□ 0.09
TRN1tP(UGG)A YJR061WP40355 935 aa15.63■□□□□ 0.09
TRN1tP(UGG)A SEC28P40509 296 aaKnown RBP15.63■□□□□ 0.09
TRN1tP(UGG)A NIS1P53939 407 aa15.63■□□□□ 0.09
TRN1tP(UGG)A UBX4P54730 416 aa15.63■□□□□ 0.09
TRN1tP(UGG)A ADE12P80210 433 aaKnown RBP15.63■□□□□ 0.09
TRN1tP(UGG)A RNY1Q02933 434 aaKnown RBP15.63■□□□□ 0.09
TRN1tP(UGG)A CRN1Q06440 651 aa15.63■□□□□ 0.09
TRN1tP(UGG)A CHS5Q12114 671 aaKnown RBP15.63■□□□□ 0.09
TRN1tP(UGG)A MF(ALPHA)2P32435 120 aa15.62■□□□□ 0.09
TRN1tP(UGG)A PHA2P32452 334 aa15.62■□□□□ 0.09
TRN1tP(UGG)A SPS19P32573 292 aaKnown RBP15.62■□□□□ 0.09
TRN1tP(UGG)A OAF1P39720 1047 aaPredicted RBP15.62■□□□□ 0.09
TRN1tP(UGG)A HAT2P39984 401 aa15.62■□□□□ 0.09
TRN1tP(UGG)A HPF1Q05164 967 aa15.62■□□□□ 0.09
TRN1tP(UGG)A UTP13Q05946 817 aaKnown RBP15.62■□□□□ 0.09
TRN1tP(UGG)A OPI10Q08202 246 aa15.62■□□□□ 0.09
TRN1tP(UGG)A GNT1Q12096 491 aa15.62■□□□□ 0.09
TRN1tP(UGG)A APA1P16550 321 aaKnown RBP15.61■□□□□ 0.09
TRN1tP(UGG)A PHO3P24031 467 aa15.61■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms