RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YBR085C-AO43137 85 aa2.57□□□□□ -2
BRO1YPL084W URE2P23202 354 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W PRE8P23639 250 aa2.57□□□□□ -2
BRO1YPL084W YCR006CP25350 157 aa2.57□□□□□ -2
BRO1YPL084W MSS51P32335 436 aa2.57□□□□□ -2
BRO1YPL084W ORC2P32833 620 aa2.57□□□□□ -2
BRO1YPL084W SOF1P33750 489 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W LHS1P36016 881 aa2.57□□□□□ -2
BRO1YPL084W AAP1P37898 856 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W ERP2P39704 215 aa2.57□□□□□ -2
BRO1YPL084W NOP16P40007 231 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W PHM8P40025 321 aa2.57□□□□□ -2
BRO1YPL084W MRX1P40050 688 aa2.57□□□□□ -2
BRO1YPL084W SEC24P40482 926 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W IRC7P43623 340 aa2.57□□□□□ -2
BRO1YPL084W AAD10P47182 288 aa2.57□□□□□ -2
BRO1YPL084W INN1P53901 409 aa2.57□□□□□ -2
BRO1YPL084W YSA1Q01976 231 aa2.57□□□□□ -2
BRO1YPL084W ORM2Q06144 216 aa2.57□□□□□ -2
BRO1YPL084W RRI2Q12348 645 aa2.57□□□□□ -2
BRO1YPL084W NDJ1Q12366 352 aa2.57□□□□□ -2
BRO1YPL084W PET111P08468 800 aa2.57□□□□□ -2
BRO1YPL084W ILS1P09436 1072 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W RPN12P32496 274 aa2.57□□□□□ -2
BRO1YPL084W SEC31P38968 1273 aaKnown RBP2.57□□□□□ -2
BRO1YPL084W ORC5P50874 479 aa2.57□□□□□ -2
BRO1YPL084W THI7Q05998 598 aa2.57□□□□□ -2
BRO1YPL084W SKG3Q06315 1026 aa2.57□□□□□ -2
BRO1YPL084W IRC3Q06683 689 aa2.57□□□□□ -2
BRO1YPL084W HUA2Q12134 243 aa2.57□□□□□ -2
BRO1YPL084W YNL162W-AQ3E7A8 72 aa2.57□□□□□ -2
BRO1YPL084W RTS1P38903 757 aa2.56□□□□□ -2
BRO1YPL084W JHD1P40034 492 aa2.56□□□□□ -2
BRO1YPL084W ATF1P40353 525 aa2.56□□□□□ -2
BRO1YPL084W CDC1P40986 491 aa2.56□□□□□ -2
BRO1YPL084W NMD5P46970 1048 aa2.56□□□□□ -2
BRO1YPL084W YGL036WP53185 909 aaPredicted RBP2.56□□□□□ -2
BRO1YPL084W RIX7Q07844 837 aaKnown RBP2.56□□□□□ -2
BRO1YPL084W YMR085WP0CF18 432 aa2.56□□□□□ -2
BRO1YPL084W RPL19AP0CX82 189 aaKnown RBP2.56□□□□□ -2
BRO1YPL084W RPL19BP0CX83 189 aaPredicted RBP2.56□□□□□ -2
BRO1YPL084W MRP2P10663 115 aaPredicted RBP2.56□□□□□ -2
BRO1YPL084W YCK1P23291 538 aa2.56□□□□□ -2
BRO1YPL084W MBR1P23493 339 aa2.56□□□□□ -2
BRO1YPL084W YBL029WP38201 376 aa2.56□□□□□ -2
BRO1YPL084W ECM10P39987 644 aa2.56□□□□□ -2
BRO1YPL084W DUO1P53168 247 aaKnown RBP2.56□□□□□ -2
BRO1YPL084W YKU80Q04437 629 aa2.56□□□□□ -2
BRO1YPL084W COQ11Q05892 277 aa2.56□□□□□ -2
BRO1YPL084W YLR049CQ12110 428 aa2.56□□□□□ -2
BRO1YPL084W YER145C-AA0A023PYF4 145 aa2.55□□□□□ -2
BRO1YPL084W PGK1P00560 416 aaKnown RBP2.55□□□□□ -2
BRO1YPL084W IMP2'P32351 346 aa2.55□□□□□ -2
BRO1YPL084W YFR020WP43600 232 aa2.55□□□□□ -2
BRO1YPL084W TCO89Q08921 799 aa2.55□□□□□ -2
BRO1YPL084W PFA4Q12006 378 aa2.55□□□□□ -2
BRO1YPL084W YBR126W-AQ8TGU7 68 aa2.55□□□□□ -2
BRO1YPL084W SEM1O94742 89 aa2.54□□□□□ -2
BRO1YPL084W HXK2P04807 486 aaKnown RBP2.54□□□□□ -2
BRO1YPL084W MAL33P38157 468 aa2.54□□□□□ -2
BRO1YPL084W BUR6P40096 142 aa2.54□□□□□ -2
BRO1YPL084W SNO3P43544 222 aa2.54□□□□□ -2
BRO1YPL084W CTK2P46962 323 aa2.54□□□□□ -2
BRO1YPL084W LYS4P49367 693 aaPredicted RBP2.54□□□□□ -2
BRO1YPL084W RSC9Q03124 581 aa2.54□□□□□ -2
BRO1YPL084W PFA5Q03289 374 aa2.54□□□□□ -2
BRO1YPL084W PDR8Q06149 701 aa2.54□□□□□ -2
BRO1YPL084W MED1Q12321 566 aa2.54□□□□□ -2
BRO1YPL084W CHO1P08456 276 aa2.54□□□□□ -2
BRO1YPL084W OCT1P35999 772 aa2.54□□□□□ -2
BRO1YPL084W AUR1P36107 401 aaPredicted RBP2.54□□□□□ -2
BRO1YPL084W ARN1P38731 627 aa2.54□□□□□ -2
BRO1YPL084W YJL107CP42947 387 aa2.54□□□□□ -2
BRO1YPL084W IST1P53843 298 aaPredicted RBP2.54□□□□□ -2
BRO1YPL084W IDP3P53982 420 aaKnown RBP2.54□□□□□ -2
BRO1YPL084W RIM13Q03792 727 aa2.54□□□□□ -2
BRO1YPL084W SEG1Q04279 960 aa2.54□□□□□ -2
BRO1YPL084W YLR455WQ06188 304 aa2.54□□□□□ -2
BRO1YPL084W TKL1P23254 680 aaKnown RBP2.53□□□□□ -2
BRO1YPL084W POL4P25615 582 aa2.53□□□□□ -2
BRO1YPL084W COQ3P27680 312 aa2.53□□□□□ -2
BRO1YPL084W NDE1P40215 560 aa2.53□□□□□ -2
BRO1YPL084W XBP1P40489 647 aa2.53□□□□□ -2
BRO1YPL084W DPB11P47027 764 aaPredicted RBP2.53□□□□□ -2
BRO1YPL084W INA17Q02888 182 aa2.53□□□□□ -2
BRO1YPL084W PSR1Q07800 427 aa2.53□□□□□ -2
BRO1YPL084W MCH4Q08268 501 aa2.53□□□□□ -2
BRO1YPL084W GET3Q12154 354 aaKnown RBP2.53□□□□□ -2
BRO1YPL084W MON2P48563 1636 aaPredicted RBP2.53□□□□□ -2
BRO1YPL084W GAL4P04386 881 aa2.53□□□□□ -2
BRO1YPL084W SEC53P07283 254 aaKnown RBP2.53□□□□□ -2
BRO1YPL084W GPA1P08539 472 aa2.53□□□□□ -2
BRO1YPL084W HSC82P15108 705 aaKnown RBP2.53□□□□□ -2
BRO1YPL084W SAC6P32599 642 aaKnown RBP2.53□□□□□ -2
BRO1YPL084W LCL3P53153 274 aa2.53□□□□□ -2
BRO1YPL084W NGL3Q03210 505 aa2.53□□□□□ -2
BRO1YPL084W YOL159CQ08300 171 aa2.53□□□□□ -2
BRO1YPL084W RAP1P11938 827 aa2.52□□□□□ -2.01
BRO1YPL084W MET8P15807 274 aa2.52□□□□□ -2.01
BRO1YPL084W KAR3P17119 729 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms