RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YGR067CP53243 804 aa2.8□□□□□ -1.96
CAF120YNL278W ERV25P54837 211 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W YPL014WQ02606 381 aa2.8□□□□□ -1.96
CAF120YNL278W SPC24Q04477 213 aa2.8□□□□□ -1.96
CAF120YNL278W UTP21Q06078 939 aaPredicted RBP2.8□□□□□ -1.96
CAF120YNL278W LOT6Q07923 191 aa2.8□□□□□ -1.96
CAF120YNL278W TMA16Q08687 178 aa2.8□□□□□ -1.96
CAF120YNL278W ATP6P00854 259 aa2.79□□□□□ -1.96
CAF120YNL278W CHO2P05374 869 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W YMR085WP0CF18 432 aa2.79□□□□□ -1.96
CAF120YNL278W CAF20P12962 161 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W MSN1P22148 382 aa2.79□□□□□ -1.96
CAF120YNL278W PRP28P23394 588 aa2.79□□□□□ -1.96
CAF120YNL278W AAT2P23542 418 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W KIN82P25341 720 aa2.79□□□□□ -1.96
CAF120YNL278W APE2P32454 952 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W RSM22P36056 628 aa2.79□□□□□ -1.96
CAF120YNL278W TFA2P36145 328 aa2.79□□□□□ -1.96
CAF120YNL278W MBP1P39678 833 aa2.79□□□□□ -1.96
CAF120YNL278W INA22P40576 216 aa2.79□□□□□ -1.96
CAF120YNL278W LIF1P53150 421 aa2.79□□□□□ -1.96
CAF120YNL278W IST1P53843 298 aaPredicted RBP2.79□□□□□ -1.96
CAF120YNL278W PGA2P53903 129 aa2.79□□□□□ -1.96
CAF120YNL278W GTR1Q00582 310 aa2.79□□□□□ -1.96
CAF120YNL278W ECM9Q02202 377 aa2.79□□□□□ -1.96
CAF120YNL278W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
CAF120YNL278W CDC8P00572 216 aa2.79□□□□□ -1.96
CAF120YNL278W ARG81P05085 880 aa2.79□□□□□ -1.96
CAF120YNL278W STE4P18851 423 aa2.79□□□□□ -1.96
CAF120YNL278W VPS3P23643 1011 aa2.79□□□□□ -1.96
CAF120YNL278W ERG3P32353 365 aa2.79□□□□□ -1.96
CAF120YNL278W DOA4P32571 926 aa2.79□□□□□ -1.96
CAF120YNL278W LAS1P36146 502 aaPredicted RBP2.79□□□□□ -1.96
CAF120YNL278W TVP38P36164 337 aa2.79□□□□□ -1.96
CAF120YNL278W STV1P37296 890 aa2.79□□□□□ -1.96
CAF120YNL278W SPP381P38282 291 aaPredicted RBP2.79□□□□□ -1.96
CAF120YNL278W PCM1P38628 557 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W RIM4P38741 713 aa2.79□□□□□ -1.96
CAF120YNL278W PRM9P39551 298 aa2.79□□□□□ -1.96
CAF120YNL278W NTA1P40354 457 aa2.79□□□□□ -1.96
CAF120YNL278W NSG2P53898 299 aa2.79□□□□□ -1.96
CAF120YNL278W YLR287CQ05881 355 aa2.79□□□□□ -1.96
CAF120YNL278W THI7Q05998 598 aa2.79□□□□□ -1.96
CAF120YNL278W TRE2Q08693 809 aa2.79□□□□□ -1.96
CAF120YNL278W TRM8Q12009 286 aa2.79□□□□□ -1.96
CAF120YNL278W CDC19P00549 500 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W TUB2P02557 457 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W BI2P03873 423 aa2.79□□□□□ -1.96
CAF120YNL278W ATP12P22135 325 aa2.79□□□□□ -1.96
CAF120YNL278W SPS22P25380 463 aa2.79□□□□□ -1.96
CAF120YNL278W ARE1P25628 610 aa2.79□□□□□ -1.96
CAF120YNL278W FUN30P31380 1131 aa2.79□□□□□ -1.96
CAF120YNL278W TPS2P31688 896 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W NPL6P32832 435 aa2.79□□□□□ -1.96
CAF120YNL278W YET1P35723 206 aa2.79□□□□□ -1.96
CAF120YNL278W DBP7P36120 742 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W HMT1P38074 348 aa2.79□□□□□ -1.96
CAF120YNL278W ALG14P38242 237 aa2.79□□□□□ -1.96
CAF120YNL278W MSG5P38590 489 aa2.79□□□□□ -1.96
CAF120YNL278W MTG2P38860 518 aa2.79□□□□□ -1.96
CAF120YNL278W ASG1P40467 964 aa2.79□□□□□ -1.96
CAF120YNL278W YJR098CP47139 656 aa2.79□□□□□ -1.96
CAF120YNL278W NBP1P52919 319 aaPredicted RBP2.79□□□□□ -1.96
CAF120YNL278W IMA1P53051 589 aa2.79□□□□□ -1.96
CAF120YNL278W TAD1P53065 400 aa2.79□□□□□ -1.96
CAF120YNL278W PEX31P53203 462 aa2.79□□□□□ -1.96
CAF120YNL278W YGR111WP53265 400 aa2.79□□□□□ -1.96
CAF120YNL278W TOF1P53840 1238 aa2.79□□□□□ -1.96
CAF120YNL278W ASI1P54074 624 aa2.79□□□□□ -1.96
CAF120YNL278W MUB1Q03162 620 aa2.79□□□□□ -1.96
CAF120YNL278W SKY1Q03656 742 aa2.79□□□□□ -1.96
CAF120YNL278W GSF2Q04697 403 aaKnown RBP2.79□□□□□ -1.96
CAF120YNL278W ATG23Q06671 453 aa2.79□□□□□ -1.96
CAF120YNL278W OXR1Q08952 273 aa2.79□□□□□ -1.96
CAF120YNL278W SEC39Q12745 709 aa2.79□□□□□ -1.96
CAF120YNL278W ISN1Q99312 450 aa2.79□□□□□ -1.96
CAF120YNL278W BI3Q9ZZW7 517 aa2.79□□□□□ -1.96
CAF120YNL278W MOD5P07884 428 aa2.78□□□□□ -1.96
CAF120YNL278W NCP1P16603 691 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W PRP6P19735 899 aaPredicted RBP2.78□□□□□ -1.96
CAF120YNL278W VPS1P21576 704 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W CHL1P22516 861 aaPredicted RBP2.78□□□□□ -1.96
CAF120YNL278W CSM1P25651 190 aa2.78□□□□□ -1.96
CAF120YNL278W POT1P27796 417 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
CAF120YNL278W SBA1P28707 216 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W PRO3P32263 286 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W MCR1P36060 302 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W SIP3P38717 1229 aa2.78□□□□□ -1.96
CAF120YNL278W RGA1P39083 1007 aa2.78□□□□□ -1.96
CAF120YNL278W PTC2P39966 464 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W YEL025CP39991 1188 aa2.78□□□□□ -1.96
CAF120YNL278W NOP16P40007 231 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W KAP123P40069 1113 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W YJR061WP40355 935 aa2.78□□□□□ -1.96
CAF120YNL278W CCT7P42943 550 aaKnown RBP2.78□□□□□ -1.96
CAF120YNL278W CNN1P43618 361 aa2.78□□□□□ -1.96
CAF120YNL278W SPO74P45819 413 aa2.78□□□□□ -1.96
CAF120YNL278W SNX4P47057 423 aa2.78□□□□□ -1.96
CAF120YNL278W TMA22P47089 198 aaPredicted RBP2.78□□□□□ -1.96
CAF120YNL278W ARI1P53111 347 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms