RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	SEC31	P38968	1273 aa	Known RBP	4.93	□□□□□ -1.62
CUS1	YMR240C	SPN1	Q06505	410 aa	Predicted RBP	4.93	□□□□□ -1.62
CUS1	YMR240C	LYS21	Q12122	440 aa	Known RBP	4.93	□□□□□ -1.62
CUS1	YMR240C	RDL1	Q12305	139 aa	Known RBP	4.93	□□□□□ -1.62
CUS1	YMR240C	NOP58	Q12499	511 aa	Known RBP	4.93	□□□□□ -1.62
CUS1	YMR240C	SEC53	P07283	254 aa	Known RBP	4.92	□□□□□ -1.62
CUS1	YMR240C	YCK1	P23291	538 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	SGF29	P25554	259 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	GSH1	P32477	678 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	MFT1	P33441	392 aa	Known RBP	4.92	□□□□□ -1.62
CUS1	YMR240C	YNG2	P38806	282 aa	Known RBP	4.92	□□□□□ -1.62
CUS1	YMR240C	FLC2	P39719	783 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	MRX1	P40050	688 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	SEC24	P40482	926 aa	Known RBP	4.92	□□□□□ -1.62
CUS1	YMR240C	RBG2	P53295	368 aa	Known RBP	4.92	□□□□□ -1.62
CUS1	YMR240C	FMP30	Q02883	468 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	NMD4	Q12129	218 aa		4.92	□□□□□ -1.62
CUS1	YMR240C	BI2	P03873	423 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	SUI3	P09064	285 aa	Known RBP	4.91	□□□□□ -1.62
CUS1	YMR240C	MAK32	P23060	363 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	LHS1	P36016	881 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	YBR225W	P38321	900 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	RTS1	P38903	757 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	YGL036W	P53185	909 aa	Predicted RBP	4.91	□□□□□ -1.62
CUS1	YMR240C	RSM28	Q03430	361 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	ARO10	Q06408	635 aa		4.91	□□□□□ -1.62
CUS1	YMR240C	PDB1	P32473	366 aa	Known RBP	4.9	□□□□□ -1.63
CUS1	YMR240C	SOF1	P33750	489 aa	Known RBP	4.9	□□□□□ -1.63
CUS1	YMR240C	JHD1	P40034	492 aa		4.9	□□□□□ -1.63
CUS1	YMR240C	IST1	P53843	298 aa	Predicted RBP	4.9	□□□□□ -1.63
CUS1	YMR240C	TDA9	Q04545	1251 aa		4.9	□□□□□ -1.63
CUS1	YMR240C	BSP1	Q06604	576 aa		4.9	□□□□□ -1.63
CUS1	YMR240C	THI3	Q07471	609 aa		4.9	□□□□□ -1.63
CUS1	YMR240C	TCO89	Q08921	799 aa		4.9	□□□□□ -1.63
CUS1	YMR240C	GCN4	P03069	281 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	PPZ2	P33329	710 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	ADE17	P38009	592 aa	Known RBP	4.89	□□□□□ -1.63
CUS1	YMR240C	FTH1	P38310	465 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	ECM10	P39987	644 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	IRC6	P43615	237 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	PSR1	Q07800	427 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	YOR389W	Q08912	624 aa		4.89	□□□□□ -1.63
CUS1	YMR240C	TUB1	P09733	447 aa	Known RBP	4.88	□□□□□ -1.63
CUS1	YMR240C	HOT13	P36078	116 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	AUR1	P36107	401 aa	Predicted RBP	4.88	□□□□□ -1.63
CUS1	YMR240C	MAL33	P38157	468 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	UBP13	P38187	747 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	NPR2	P39923	615 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	TAX4	P47030	604 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	YPR003C	P53394	754 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	ARE2	P53629	642 aa	Known RBP	4.88	□□□□□ -1.63
CUS1	YMR240C	VPS75	P53853	264 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	MFB1	Q04922	465 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	CTI6	Q08923	506 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	RCN2	Q12044	265 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	TAH18	Q12181	623 aa		4.88	□□□□□ -1.63
CUS1	YMR240C	HXK2	P04807	486 aa	Known RBP	4.87	□□□□□ -1.63
CUS1	YMR240C	MPE1	P35728	441 aa	Known RBP	4.87	□□□□□ -1.63
CUS1	YMR240C	AGP2	P38090	596 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	IMD2	P38697	523 aa	Known RBP	4.87	□□□□□ -1.63
CUS1	YMR240C	RIX1	P38883	763 aa	Predicted RBP	4.87	□□□□□ -1.63
CUS1	YMR240C	CDC1	P40986	491 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	CTK2	P46962	323 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	MRX6	P48564	524 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	IMD3	P50095	523 aa	Known RBP	4.87	□□□□□ -1.63
CUS1	YMR240C	STR3	P53101	465 aa	Known RBP	4.87	□□□□□ -1.63
CUS1	YMR240C	TIM10	P87108	93 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	NGL3	Q03210	505 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	ARP9	Q05123	467 aa		4.87	□□□□□ -1.63
CUS1	YMR240C	PET111	P08468	800 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	MRP2	P10663	115 aa	Predicted RBP	4.86	□□□□□ -1.63
CUS1	YMR240C	PWP1	P21304	576 aa	Known RBP	4.86	□□□□□ -1.63
CUS1	YMR240C	DIA4	P38705	446 aa	Predicted RBP	4.86	□□□□□ -1.63
CUS1	YMR240C	UIP3	P39547	235 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	ERV46	P39727	415 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	PKP1	P40530	394 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	CIN1	P40987	1014 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	LYS4	P49367	693 aa	Predicted RBP	4.86	□□□□□ -1.63
CUS1	YMR240C	DSD1	P53095	428 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	CIR2	Q08822	631 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	YPL272C	Q08984	517 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	SPE4	Q12455	300 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	YLR111W	Q12528	110 aa		4.86	□□□□□ -1.63
CUS1	YMR240C	BNR1	P40450	1375 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	FLO10	P36170	1169 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	UTP9	P38882	575 aa	Known RBP	4.85	□□□□□ -1.63
CUS1	YMR240C	ARF3	P40994	183 aa	RIP-Chip data	4.85	□□□□□ -1.63	not detected
CUS1	YMR240C	DPB11	P47027	764 aa	Predicted RBP	4.85	□□□□□ -1.63
CUS1	YMR240C	SGM1	P47166	707 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	BPL1	P48445	690 aa	Predicted RBP	4.85	□□□□□ -1.63
CUS1	YMR240C	GLO1	P50107	326 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	MRPL19	P53875	158 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	YPL071C	Q02864	156 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	SPC19	Q03954	165 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	OSW1	Q08692	278 aa		4.85	□□□□□ -1.63
CUS1	YMR240C	ILS1	P09436	1072 aa	Known RBP	4.84	□□□□□ -1.63
CUS1	YMR240C	VMA16	P23968	213 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	OCA4	P25366	362 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	POL4	P25615	582 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms