RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C GIP4P39732 760 aa4.77□□□□□ -1.65
EAR1YMR171C YEL076CP39971 216 aa4.77□□□□□ -1.65
EAR1YMR171C EAF5P39995 279 aa4.77□□□□□ -1.65
EAR1YMR171C MET14Q02196 202 aa4.77□□□□□ -1.65
EAR1YMR171C NSE5Q03718 556 aa4.77□□□□□ -1.65
EAR1YMR171C SIL1Q08199 421 aa4.77□□□□□ -1.65
EAR1YMR171C AIM41Q12032 185 aa4.77□□□□□ -1.65
EAR1YMR171C SEC39Q12745 709 aa4.77□□□□□ -1.65
EAR1YMR171C ILV1P00927 576 aaKnown RBP4.77□□□□□ -1.65
EAR1YMR171C ADH4P10127 382 aa4.77□□□□□ -1.65
EAR1YMR171C ERG11P10614 530 aa4.77□□□□□ -1.65
EAR1YMR171C KIN82P25341 720 aa4.77□□□□□ -1.65
EAR1YMR171C YME1P32795 747 aa4.77□□□□□ -1.65
EAR1YMR171C SUL1P38359 859 aa4.77□□□□□ -1.65
EAR1YMR171C SAP185P40856 1058 aa4.77□□□□□ -1.65
EAR1YMR171C YNL320WP42840 284 aa4.77□□□□□ -1.65
EAR1YMR171C VID30P53076 958 aa4.77□□□□□ -1.65
EAR1YMR171C HOL1P53389 586 aa4.77□□□□□ -1.65
EAR1YMR171C CPR6P53691 371 aaKnown RBP4.77□□□□□ -1.65
EAR1YMR171C PGA2P53903 129 aa4.77□□□□□ -1.65
EAR1YMR171C KIN4Q01919 800 aa4.77□□□□□ -1.65
EAR1YMR171C ADA2Q02336 434 aa4.77□□□□□ -1.65
EAR1YMR171C PPN1Q04119 674 aa4.77□□□□□ -1.65
EAR1YMR171C RPS9BP05755 195 aaKnown RBP4.76□□□□□ -1.65
EAR1YMR171C ARG1P22768 420 aa4.76□□□□□ -1.65
EAR1YMR171C PRP22P24384 1145 aaKnown RBP4.76□□□□□ -1.65
EAR1YMR171C YCR051WP25631 222 aa4.76□□□□□ -1.65
EAR1YMR171C CHS3P29465 1165 aa4.76□□□□□ -1.65
EAR1YMR171C CBF5P33322 483 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
EAR1YMR171C HIS7P33734 552 aaKnown RBP4.76□□□□□ -1.65
EAR1YMR171C TRM2P33753 639 aa4.76□□□□□ -1.65
EAR1YMR171C TIF5P38431 405 aaKnown RBP4.76□□□□□ -1.65
EAR1YMR171C YHR033WP38690 423 aa4.76□□□□□ -1.65
EAR1YMR171C PIH1P38768 344 aa4.76□□□□□ -1.65
EAR1YMR171C HRB1P38922 454 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
EAR1YMR171C INA22P40576 216 aa4.76□□□□□ -1.65
EAR1YMR171C GSM1P42950 618 aa4.76□□□□□ -1.65
EAR1YMR171C NBP1P52919 319 aaPredicted RBP4.76□□□□□ -1.65
EAR1YMR171C NCS2P53923 493 aaPredicted RBP4.76□□□□□ -1.65
EAR1YMR171C UTP6Q02354 440 aaKnown RBP4.76□□□□□ -1.65
EAR1YMR171C DIG1Q03063 452 aaKnown RBP4.76□□□□□ -1.65
EAR1YMR171C ERO1Q03103 563 aa4.76□□□□□ -1.65
EAR1YMR171C FUS2Q05670 677 aa4.76□□□□□ -1.65
EAR1YMR171C YLR297WQ05899 129 aa4.76□□□□□ -1.65
EAR1YMR171C PIG1Q06216 648 aa4.76□□□□□ -1.65
EAR1YMR171C SKG3Q06315 1026 aa4.76□□□□□ -1.65
EAR1YMR171C PCL8Q08966 492 aa4.76□□□□□ -1.65
EAR1YMR171C YLR462WO13556 202 aa4.75□□□□□ -1.65
EAR1YMR171C GAL1P04385 528 aa4.75□□□□□ -1.65
EAR1YMR171C SNF1P06782 633 aaKnown RBP4.75□□□□□ -1.65
EAR1YMR171C POL3P15436 1097 aa4.75□□□□□ -1.65
EAR1YMR171C SPO16P17122 198 aa4.75□□□□□ -1.65
EAR1YMR171C PRE4P30657 266 aa4.75□□□□□ -1.65
EAR1YMR171C PDB1P32473 366 aaKnown RBP4.75□□□□□ -1.65
EAR1YMR171C MTC7P32633 139 aa4.75□□□□□ -1.65
EAR1YMR171C BCS1P32839 456 aa4.75□□□□□ -1.65
EAR1YMR171C YKL050CP35736 922 aa4.75□□□□□ -1.65
EAR1YMR171C HEK2P38199 381 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
EAR1YMR171C HIS2P38635 335 aa4.75□□□□□ -1.65
EAR1YMR171C YHL049CP38722 271 aa4.75□□□□□ -1.65
EAR1YMR171C YEL075CP39972 122 aa4.75□□□□□ -1.65
EAR1YMR171C LCP5P40079 357 aaPredicted RBP4.75□□□□□ -1.65
EAR1YMR171C YER189WP40104 122 aa4.75□□□□□ -1.65
EAR1YMR171C YFL064CP43540 174 aa4.75□□□□□ -1.65
EAR1YMR171C URB2P47108 1174 aa4.75□□□□□ -1.65
EAR1YMR171C PAN2P53010 1115 aaPredicted RBP4.75□□□□□ -1.65
EAR1YMR171C CNM67P53865 581 aaKnown RBP4.75□□□□□ -1.65
EAR1YMR171C ESBP6P53918 673 aa4.75□□□□□ -1.65
EAR1YMR171C RPL22BP56628 122 aaKnown RBP4.75□□□□□ -1.65
EAR1YMR171C GTR1Q00582 310 aa4.75□□□□□ -1.65
EAR1YMR171C MTD1Q02046 320 aaKnown RBP4.75□□□□□ -1.65
EAR1YMR171C VPS72Q03388 795 aa4.75□□□□□ -1.65
EAR1YMR171C SPC24Q04477 213 aa4.75□□□□□ -1.65
EAR1YMR171C HIF1Q12373 385 aa4.75□□□□□ -1.65
EAR1YMR171C NCA2Q12374 616 aa4.75□□□□□ -1.65
EAR1YMR171C GRX6Q12438 231 aa4.75□□□□□ -1.65
EAR1YMR171C YBL111CQ3E7Y5 667 aa4.75□□□□□ -1.65
EAR1YMR171C PCK1P10963 549 aa4.74□□□□□ -1.65
EAR1YMR171C SEC15P22224 910 aa4.74□□□□□ -1.65
EAR1YMR171C FEN2P25621 512 aaKnown RBP4.74□□□□□ -1.65
EAR1YMR171C SFB3P38810 929 aa4.74□□□□□ -1.65
EAR1YMR171C REV7P38927 245 aa4.74□□□□□ -1.65
EAR1YMR171C TIF4631P39935 952 aaKnown RBP4.74□□□□□ -1.65
EAR1YMR171C FMP52P40008 231 aa4.74□□□□□ -1.65
EAR1YMR171C SMX2P40204 77 aaKnown RBP4.74□□□□□ -1.65
EAR1YMR171C YIL077CP40508 320 aa4.74□□□□□ -1.65
EAR1YMR171C FAR8Q05040 523 aa4.74□□□□□ -1.65
EAR1YMR171C CMS1Q07897 291 aaKnown RBP4.74□□□□□ -1.65
EAR1YMR171C YOL073CQ08232 322 aa4.74□□□□□ -1.65
EAR1YMR171C SIR3P06701 978 aa4.73□□□□□ -1.65
EAR1YMR171C KRS1P15180 591 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C SRV2P17555 526 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C RPS7AP26786 190 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C NIP1P32497 812 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C YKL023WP36103 277 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C CST26P38226 397 aa4.73□□□□□ -1.65
EAR1YMR171C COS111P38308 924 aa4.73□□□□□ -1.65
EAR1YMR171C STL1P39932 569 aa4.73□□□□□ -1.65
EAR1YMR171C KAP123P40069 1113 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C PRM2P40534 656 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms