RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C TRX2P22803 104 aaKnown RBP9.19□□□□□ -0.94
SEC61YLR378C LIP5P32875 414 aa9.19□□□□□ -0.94
SEC61YLR378C TFC3P34111 1160 aa9.19□□□□□ -0.94
SEC61YLR378C POL12P38121 705 aaPredicted RBP9.19□□□□□ -0.94
SEC61YLR378C BZZ1P38822 633 aa9.19□□□□□ -0.94
SEC61YLR378C SHU2P38957 223 aa9.19□□□□□ -0.94
SEC61YLR378C ACO2P39533 789 aa9.19□□□□□ -0.94
SEC61YLR378C MGS1P40151 587 aa9.19□□□□□ -0.94
SEC61YLR378C CHS6P40955 746 aa9.19□□□□□ -0.94
SEC61YLR378C AIM14P53109 570 aa9.19□□□□□ -0.94
SEC61YLR378C LGE1Q02796 332 aaKnown RBP9.19□□□□□ -0.94
SEC61YLR378C LEE1Q02799 301 aaKnown RBP9.19□□□□□ -0.94
SEC61YLR378C NHP10Q03435 203 aa9.19□□□□□ -0.94
SEC61YLR378C FMN1Q03778 218 aa9.19□□□□□ -0.94
SEC61YLR378C CRN1Q06440 651 aa9.19□□□□□ -0.94
SEC61YLR378C VPS13Q07878 3144 aa9.18□□□□□ -0.94
SEC61YLR378C YPR089WO13585 888 aa9.18□□□□□ -0.94
SEC61YLR378C GLN4P13188 809 aaKnown RBP9.18□□□□□ -0.94
SEC61YLR378C GAL11P19659 1081 aa9.18□□□□□ -0.94
SEC61YLR378C PWP1P21304 576 aaKnown RBP9.18□□□□□ -0.94
SEC61YLR378C STE13P33894 931 aa9.18□□□□□ -0.94
SEC61YLR378C STB6P36085 766 aa9.18□□□□□ -0.94
SEC61YLR378C SRP72P38688 640 aaKnown RBP9.18□□□□□ -0.94
SEC61YLR378C GGA2P38817 585 aaKnown RBP9.18□□□□□ -0.94
SEC61YLR378C RLP7P40693 322 aaKnown RBP9.18□□□□□ -0.94
SEC61YLR378C BOL2P53082 120 aa9.18□□□□□ -0.94
SEC61YLR378C IPI3P53877 555 aa9.18□□□□□ -0.94
SEC61YLR378C RNY1Q02933 434 aaKnown RBP9.18□□□□□ -0.94
SEC61YLR378C YPR114WQ06107 315 aa9.18□□□□□ -0.94
SEC61YLR378C NUS1Q12063 375 aa9.18□□□□□ -0.94
SEC61YLR378C YLR046CQ12253 270 aa9.18□□□□□ -0.94
SEC61YLR378C STE2D6VTK4 431 aa9.17□□□□□ -0.94
SEC61YLR378C RHO2P06781 192 aa9.17□□□□□ -0.94
SEC61YLR378C NMT1P14743 455 aa9.17□□□□□ -0.94
SEC61YLR378C YCR099CP25657 155 aa9.17□□□□□ -0.94
SEC61YLR378C YKR023WP36119 530 aaKnown RBP9.17□□□□□ -0.94
SEC61YLR378C CTP1P38152 299 aa9.17□□□□□ -0.94
SEC61YLR378C SEC31P38968 1273 aaKnown RBP9.17□□□□□ -0.94
SEC61YLR378C HEM14P40012 539 aa9.17□□□□□ -0.94
SEC61YLR378C ALG8P40351 577 aa9.17□□□□□ -0.94
SEC61YLR378C CSN12P47130 423 aa9.17□□□□□ -0.94
SEC61YLR378C SPP2Q02521 185 aa9.17□□□□□ -0.94
SEC61YLR378C MCP2Q06567 569 aa9.17□□□□□ -0.94
SEC61YLR378C MDY2Q12285 212 aa9.17□□□□□ -0.94
SEC61YLR378C STB3Q12427 513 aa9.17□□□□□ -0.94
SEC61YLR378C HEM2P05373 342 aa9.16□□□□□ -0.94
SEC61YLR378C SBP1P10080 294 aaKnown RBP9.16□□□□□ -0.94
SEC61YLR378C AMD1P15274 810 aaKnown RBP9.16□□□□□ -0.94
SEC61YLR378C SEC15P22224 910 aa9.16□□□□□ -0.94
SEC61YLR378C MNE1P24720 663 aa9.16□□□□□ -0.94
SEC61YLR378C GEX1P25596 615 aa9.16□□□□□ -0.94
SEC61YLR378C YCR090CP25654 182 aaKnown RBP9.16□□□□□ -0.94
SEC61YLR378C GUT2P32191 649 aa9.16□□□□□ -0.94
SEC61YLR378C MF(ALPHA)2P32435 120 aa9.16□□□□□ -0.94
SEC61YLR378C GEX2P36173 615 aa9.16□□□□□ -0.94
SEC61YLR378C YHR131CP38835 850 aa9.16□□□□□ -0.94
SEC61YLR378C UTP9P38882 575 aaKnown RBP9.16□□□□□ -0.94
SEC61YLR378C STN1P38960 494 aa9.16□□□□□ -0.94
SEC61YLR378C GCD14P46959 383 aaPredicted RBP9.16□□□□□ -0.94
SEC61YLR378C AIM23P47015 356 aa9.16□□□□□ -0.94
SEC61YLR378C TUB4P53378 473 aa9.16□□□□□ -0.94
SEC61YLR378C YNL143CP53908 130 aa9.16□□□□□ -0.94
SEC61YLR378C ORC3P54790 616 aa9.16□□□□□ -0.94
SEC61YLR378C RPL34AP87262 121 aaPredicted RBP9.16□□□□□ -0.94
SEC61YLR378C NUT2Q06213 157 aa9.16□□□□□ -0.94
SEC61YLR378C CLP1Q08685 445 aaPredicted RBP9.16□□□□□ -0.94
SEC61YLR378C UBX3Q12229 455 aa9.16□□□□□ -0.94
SEC61YLR378C RMD5Q12508 421 aa9.16□□□□□ -0.94
SEC61YLR378C YLR149CQ99296 730 aa9.16□□□□□ -0.94
SEC61YLR378C PMA2P19657 947 aa9.15□□□□□ -0.94
SEC61YLR378C PTH2P34222 208 aa9.15□□□□□ -0.94
SEC61YLR378C YHB1P39676 399 aaKnown RBP9.15□□□□□ -0.94
SEC61YLR378C PAN6P40459 309 aa9.15□□□□□ -0.94
SEC61YLR378C PRM2P40534 656 aa9.15□□□□□ -0.94
SEC61YLR378C TES1P41903 349 aaKnown RBP9.15□□□□□ -0.94
SEC61YLR378C PET130P47065 347 aa9.15□□□□□ -0.94
SEC61YLR378C COG1P53079 417 aa9.15□□□□□ -0.94
SEC61YLR378C SLM2P53955 656 aa9.15□□□□□ -0.94
SEC61YLR378C PIR1Q03178 341 aa9.15□□□□□ -0.94
SEC61YLR378C YDR132CQ03900 495 aa9.15□□□□□ -0.94
SEC61YLR378C ENT4Q07872 247 aa9.15□□□□□ -0.94
SEC61YLR378C HRK1Q08732 759 aaKnown RBP9.15□□□□□ -0.94
SEC61YLR378C VAN1P23642 535 aa9.14□□□□□ -0.95
SEC61YLR378C PYC2P32327 1180 aaKnown RBP9.14□□□□□ -0.95
SEC61YLR378C EAP1P36041 632 aaKnown RBP9.14□□□□□ -0.95
SEC61YLR378C LDB7P38210 180 aa9.14□□□□□ -0.95
SEC61YLR378C YHL008CP38750 627 aa9.14□□□□□ -0.95
SEC61YLR378C CCT7P42943 550 aaKnown RBP9.14□□□□□ -0.95
SEC61YLR378C RSM7P47150 247 aa9.14□□□□□ -0.95
SEC61YLR378C ILM1P47155 203 aa9.14□□□□□ -0.95
SEC61YLR378C YJR124CP47159 448 aa9.14□□□□□ -0.95
SEC61YLR378C AIF1P52923 378 aa9.14□□□□□ -0.95
SEC61YLR378C USE1P53146 245 aa9.14□□□□□ -0.95
SEC61YLR378C LSM3P57743 89 aaKnown RBP9.14□□□□□ -0.95
SEC61YLR378C YDR131CQ03899 556 aa9.14□□□□□ -0.95
SEC61YLR378C JIP5Q06214 492 aaPredicted RBP9.14□□□□□ -0.95
SEC61YLR378C OSW1Q08692 278 aa9.14□□□□□ -0.95
SEC61YLR378C TGL5Q12043 749 aa9.14□□□□□ -0.95
SEC61YLR378C GNT1Q12096 491 aa9.14□□□□□ -0.95
SEC61YLR378C CAR1P00812 333 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms