RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W VAS1P07806 1104 aaKnown RBP1.14□□□□□ -2.23
PRP16YKR086W VPS1P21576 704 aaKnown RBP1.14□□□□□ -2.23
PRP16YKR086W RIT1P23796 513 aa1.14□□□□□ -2.23
PRP16YKR086W MRC1P25588 1096 aa1.14□□□□□ -2.23
PRP16YKR086W TFB1P32776 642 aa1.14□□□□□ -2.23
PRP16YKR086W SEF1P34228 1148 aa1.14□□□□□ -2.23
PRP16YKR086W TMA108P40462 946 aa1.14□□□□□ -2.23
PRP16YKR086W GSM1P42950 618 aa1.14□□□□□ -2.23
PRP16YKR086W YHC3P47040 408 aa1.14□□□□□ -2.23
PRP16YKR086W TEP1P53916 434 aa1.14□□□□□ -2.23
PRP16YKR086W GYL1Q04322 720 aa1.14□□□□□ -2.23
PRP16YKR086W RGT2Q12300 763 aa1.14□□□□□ -2.23
PRP16YKR086W VPS5Q92331 675 aa1.14□□□□□ -2.23
PRP16YKR086W RTC1Q08281 1341 aa1.14□□□□□ -2.23
PRP16YKR086W FLO1P32768 1537 aa1.14□□□□□ -2.23
PRP16YKR086W SST2P11972 698 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W AMD2P22580 549 aa1.13□□□□□ -2.23
PRP16YKR086W PTP2P29461 750 aa1.13□□□□□ -2.23
PRP16YKR086W CCL1P37366 393 aa1.13□□□□□ -2.23
PRP16YKR086W IMD2P38697 523 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W RAD26P40352 1085 aa1.13□□□□□ -2.23
PRP16YKR086W NOP2P40991 618 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W IMD3P50095 523 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W COQ6P53318 479 aa1.13□□□□□ -2.23
PRP16YKR086W EAF7P53911 425 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W ACS1Q01574 713 aa1.13□□□□□ -2.23
PRP16YKR086W RAD33Q04231 177 aa1.13□□□□□ -2.23
PRP16YKR086W YDR109CQ04585 715 aa1.13□□□□□ -2.23
PRP16YKR086W ECM22Q05958 814 aaPredicted RBP1.13□□□□□ -2.23
PRP16YKR086W BLS1Q06071 122 aa1.13□□□□□ -2.23
PRP16YKR086W TPO3Q06451 622 aa1.13□□□□□ -2.23
PRP16YKR086W RAD34Q06665 692 aa1.13□□□□□ -2.23
PRP16YKR086W TUF1P02992 437 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W URA3P03962 267 aa1.13□□□□□ -2.23
PRP16YKR086W HOM3P10869 527 aa1.13□□□□□ -2.23
PRP16YKR086W RNR3P21672 869 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W GRX4P32642 244 aa1.13□□□□□ -2.23
PRP16YKR086W REG2P38232 338 aa1.13□□□□□ -2.23
PRP16YKR086W SRP68P38687 599 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W DOT5P40553 215 aa1.13□□□□□ -2.23
PRP16YKR086W OPT1P40897 799 aa1.13□□□□□ -2.23
PRP16YKR086W DUG1P43616 481 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W NIT2P47016 307 aa1.13□□□□□ -2.23
PRP16YKR086W YGL082WP53155 381 aa1.13□□□□□ -2.23
PRP16YKR086W MTD1Q02046 320 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W UBP16Q02863 499 aa1.13□□□□□ -2.23
PRP16YKR086W ARX1Q03862 593 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W PRS5Q12265 496 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W RVB2Q12464 471 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W YMR085WP0CF18 432 aa1.13□□□□□ -2.23
PRP16YKR086W WHI2P12611 486 aa1.13□□□□□ -2.23
PRP16YKR086W VPS33P20795 691 aa1.13□□□□□ -2.23
PRP16YKR086W SPE2P21182 396 aa1.13□□□□□ -2.23
PRP16YKR086W CAP1P28495 268 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W PET309P32522 965 aaPredicted RBP1.13□□□□□ -2.23
PRP16YKR086W CDC5P32562 705 aa1.13□□□□□ -2.23
PRP16YKR086W YNK1P36010 153 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W LAS21P40367 830 aa1.13□□□□□ -2.23
PRP16YKR086W ULP2P40537 1034 aaPredicted RBP1.13□□□□□ -2.23
PRP16YKR086W CDC1P40986 491 aa1.13□□□□□ -2.23
PRP16YKR086W MAD3P47074 515 aa1.13□□□□□ -2.23
PRP16YKR086W COS12P53053 380 aa1.13□□□□□ -2.23
PRP16YKR086W YRB30P53107 440 aaPredicted RBP1.13□□□□□ -2.23
PRP16YKR086W RDL1Q12305 139 aaKnown RBP1.13□□□□□ -2.23
PRP16YKR086W ARG1P22768 420 aa1.12□□□□□ -2.23
PRP16YKR086W SWI4P25302 1093 aaKnown RBP1.12□□□□□ -2.23
PRP16YKR086W LHS1P36016 881 aa1.12□□□□□ -2.23
PRP16YKR086W DRE2P36152 348 aa1.12□□□□□ -2.23
PRP16YKR086W GEX2P36173 615 aa1.12□□□□□ -2.23
PRP16YKR086W ARP1P38696 384 aa1.12□□□□□ -2.23
PRP16YKR086W PTR3P43606 678 aa1.12□□□□□ -2.23
PRP16YKR086W IRC8P47046 822 aa1.12□□□□□ -2.23
PRP16YKR086W YNR071CP53757 342 aa1.12□□□□□ -2.23
PRP16YKR086W MET14Q02196 202 aa1.12□□□□□ -2.23
PRP16YKR086W GIP3Q03016 1276 aa1.12□□□□□ -2.23
PRP16YKR086W YML119WQ03208 357 aa1.12□□□□□ -2.23
PRP16YKR086W CFT2Q12102 859 aaPredicted RBP1.12□□□□□ -2.23
PRP16YKR086W PNO1Q99216 274 aaKnown RBP1.12□□□□□ -2.23
PRP16YKR086W AAC1P04710 309 aa1.12□□□□□ -2.23
PRP16YKR086W PDE1P22434 369 aa1.12□□□□□ -2.23
PRP16YKR086W RPF2P36160 344 aaKnown RBP1.12□□□□□ -2.23
PRP16YKR086W TDA11P38854 504 aa1.12□□□□□ -2.23
PRP16YKR086W ERV46P39727 415 aa1.12□□□□□ -2.23
PRP16YKR086W JHD1P40034 492 aa1.12□□□□□ -2.23
PRP16YKR086W SAD1P43589 448 aa1.12□□□□□ -2.23
PRP16YKR086W VPS25P47142 202 aa1.12□□□□□ -2.23
PRP16YKR086W ART5P53244 586 aaKnown RBP1.12□□□□□ -2.23
PRP16YKR086W MPS1P54199 764 aa1.12□□□□□ -2.23
PRP16YKR086W NBP2Q12163 236 aa1.12□□□□□ -2.23
PRP16YKR086W YOL114CQ12322 202 aa1.12□□□□□ -2.23
PRP16YKR086W TUS1Q06412 1307 aa1.12□□□□□ -2.23
PRP16YKR086W YFL068WP0CX99 160 aa1.11□□□□□ -2.23
PRP16YKR086W YLL066W-AP0CY00 160 aa1.11□□□□□ -2.23
PRP16YKR086W YLL067W-AP0CY01 160 aa1.11□□□□□ -2.23
PRP16YKR086W PRO3P32263 286 aaKnown RBP1.11□□□□□ -2.23
PRP16YKR086W HEM12P32347 362 aaPredicted RBP1.11□□□□□ -2.23
PRP16YKR086W BEM3P32873 1128 aa1.11□□□□□ -2.23
PRP16YKR086W PEX5P35056 612 aa1.11□□□□□ -2.23
PRP16YKR086W SMK1P41808 388 aa1.11□□□□□ -2.23
PRP16YKR086W SSU1P41930 458 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 107.9 ms